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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1142 and Psest_1143 are separated by 90 nucleotides
Psest_1143 and Psest_1144 are separated by 47 nucleotides
Psest_1144 and Psest_1145 are separated by 38 nucleotides
Psest_1145 and Psest_1146 are separated by 136 nucleotides
Psest_1142: Psest_1142 - Uncharacterized protein conserved in bacteria, at 1,240,134 to 1,240,613
_1142
Psest_1143: Psest_1143 - Small-conductance mechanosensitive channel, at 1,240,704 to 1,241,528
_1143
Psest_1144: Psest_1144 - AmpG-related permease, at 1,241,576 to 1,243,276
_1144
Psest_1145: Psest_1145 - Predicted methylated DNA-protein cysteine methyltransferase, at 1,243,315 to 1,243,674
_1145
Psest_1146: Psest_1146 - Protein of unknown function, DUF481., at 1,243,811 to 1,244,815
_1146
Group
Condition
Psest
_1142
Psest
_1143
Psest
_1144
Psest
_1145
Psest
_1146
lb
LB
-0.7
-2.0
-1.1
-0.7
-0.0
stress
Neomycin 0.004 mg/ml
-0.7
-0.5
-2.8
+0.0
+0.4
stress
Vanillin 2 mM
-0.0
-1.9
-1.5
+0.1
+0.2
stress
Polymyxin B sulfate 0.0001 mg/ml
-1.0
-1.8
+0.5
-0.3
-0.5
lb
LB
-0.6
-1.5
-0.4
-0.1
-0.4
lb
LB
-0.2
-2.5
-0.4
-0.0
+0.2
stress
Chlorite 0.06 mM
-0.2
-0.6
-2.4
-0.1
+0.5
stress
nitrate 250 mM
-1.8
-0.7
-0.9
+0.1
+0.6
stress
Benzalkonium Chloride 0.002 mg/ml
-0.8
-1.9
+0.8
-0.3
-0.0
temperature
Glucose defined 30C timecourse1 timepoint 3
+0.1
+0.2
-2.6
+0.1
+0.0
carbon source
L-Proline (C)
-0.4
+0.4
-2.1
+0.5
-0.2
stress
Def Benzethonium chloride 0.008 mM
-1.0
-0.1
-1.5
+0.4
+0.7
stress
A22 0.005 mg/ml
-0.1
+0.7
-1.3
-0.4
-0.3
stress
Benzethonium chloride 0.0125 mM
+0.3
-0.6
-0.6
-0.8
+0.8
stress
Nalidixic 0.00390625 mg/ml
-0.8
-0.5
+1.2
-0.6
-0.1
stress
Cephalothin 0.04 mg/ml
+0.0
-0.4
-1.6
+0.0
+1.3
stress
Paraquat dichloride 0.015 mg/ml
-0.7
+1.0
+0.5
-0.8
-0.1
stress
methylglyoxal 0.0016 vol%
-0.0
-0.9
+0.6
-0.5
+1.0
RCH2 grown on a colony of N2F3
-1.3
+0.4
+0.9
+0.2
+0.5
stress
Fusidic 0.016 mg/ml
+0.2
-1.7
+1.8
+0.3
+0.3
stress
Furfuryl Alcohol 0.05 vol%
+0.3
-1.5
+0.6
+0.9
+0.9
stress
L-Lysine 200 mM
-0.7
+0.1
+0.4
-0.6
+2.1
RCH2 grown on a colony of 8R2A
-1.1
-0.1
+0.8
+1.3
+0.6
stress
Bacitracin 0.25 mg/ml
-0.2
-0.4
+0.4
-0.7
+2.5
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.7
+0.6
+1.8
+0.3
-0.3
stress
Bacitracin 0.25 mg/ml
+0.5
-0.5
+0.5
-0.1
+1.8
carbon source
propionate (C)
+0.6
+0.2
+3.1
-0.8
-0.6
stress
Def Vancomycin 0.016 mg/ml
+0.4
-0.0
+0.4
+0.3
+2.4
stress
Chlorate 75 mM
+0.6
+0.1
+1.8
+0.1
+0.9
carbon source
propionate (C)
+1.2
+0.1
+3.2
+0.8
-0.3
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