Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0109 and Psest_0110 are separated by 5 nucleotidesPsest_0110 and Psest_0111 are separated by 436 nucleotidesPsest_0111 and Psest_0112 are separated by 332 nucleotidesPsest_0112 and Psest_0113 are separated by 58 nucleotides Psest_0109: Psest_0109 - malonate transporter, MadL subunit, at 107,576 to 107,998 _0109 Psest_0110: Psest_0110 - malonate transporter, MadM subunit, at 108,004 to 108,768 _0110 Psest_0111: Psest_0111 - Glycine/D-amino acid oxidases (deaminating), at 109,205 to 110,464 _0111 Psest_0112: Psest_0112 - Transcriptional regulator, at 110,797 to 111,714 _0112 Psest_0113: Psest_0113 - Uncharacterized protein conserved in bacteria, at 111,773 to 112,414 _0113
Group Condition Psest_0109 Psest_0110 Psest_0111 Psest_0112 Psest_0113
nitrogen source Glycine (N) -0.0 +0.2 -4.2 -0.0 +0.1
nitrogen source Glycine (N) -0.1 +0.3 -3.6 +0.1 +0.0
RCH2 grown on a colony of Serratia -0.2 +0.3 -0.2 +0.5 -3.5
stress 5-Hydroxymethylfurfural 5 mM -0.5 -0.4 +0.0 -0.5 -0.9
RCH2 grown on a colony of N2A2 +0.2 +0.3 -0.1 -0.5 -2.0
stress nitrate 200 mM -0.1 +0.1 +0.5 +0.3 -2.7
nitrogen source L-Alanine (N) -0.3 -0.6 -0.0 -0.3 -0.7
stress nitrate 250 mM +0.8 +0.5 -0.0 +0.1 -3.4
nitrogen source Glycine (N) +0.2 +0.4 -2.2 +0.2 -0.1
stress Phosphomycin 0.012 mg/ml -0.2 +0.2 -0.1 -0.1 -1.3
stress Phosphomycin 0.012 mg/ml +0.0 +0.3 +0.0 +0.1 -2.0
RCH2 grown on a colony of ecoli +0.2 -0.1 +0.2 -0.2 -1.6
stress Vanillin 2 mM -0.2 -0.4 -0.8 +0.4 -0.2
carbon source propionate (C) -0.2 +0.2 -0.5 +0.2 -0.8
RCH2 grown on a colony of 8R2A +0.5 +0.0 -0.1 -0.1 -1.4
stress nitrate 200 mM -0.1 +0.2 +0.0 +0.2 -1.4
stress perchlorate 25 mM -0.2 +0.2 +0.4 -0.0 -1.0
nitrogen source nitrate (N) +0.2 +0.2 +0.5 -0.5 -0.8
carbon source propionate (C) +0.1 +0.3 -0.4 +0.7 -0.9
stress Polymyxin B sulfate 0.0001 mg/ml +0.3 +0.4 +0.0 +0.5 -1.3
stress Furfuryl Alcohol 0.05 vol% -0.2 -0.8 -0.5 +0.2 +1.4
nitrogen source nitrite (N) +0.4 +0.6 +0.6 -0.5 -0.9
nitrogen source L-Glutamic (N) +0.6 +0.1 -0.4 +0.7 -0.7
anaerobic nitrate reduction - anaerobic +0.4 +0.7 +0.3 +0.3 -0.6
stress Def Neomycin 0.0008 mg/ml -0.1 +0.4 +0.2 -0.2 +1.1
stress Fusidic 0.016 mg/ml +0.5 +0.6 +0.7 +0.1 -0.4
stress Chlorite 0.06 mM +0.1 -0.2 +0.2 +0.3 +1.5
stress Cephalothin 0.04 mg/ml +0.5 +0.6 +0.8 -0.2 +0.2
stress Def Benzethonium chloride 0.008 mM +0.8 +0.7 +0.5 -0.1 +0.6
carbon source RCH2 defined media +0.5 +0.8 +0.6 +0.3 +0.5
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