Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1107 and Psest_1108 are separated by 58 nucleotidesPsest_1108 and Psest_1109 are separated by 19 nucleotidesPsest_1109 and Psest_1110 are separated by 0 nucleotidesPsest_1110 and Psest_1111 are separated by 3 nucleotides Psest_1107: Psest_1107 - tRNA_Lys_TTT, at 1,202,912 to 1,202,987 _1107 Psest_1108: Psest_1108 - tRNA_Gln_TTG, at 1,203,046 to 1,203,120 _1108 Psest_1109: Psest_1109 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, at 1,203,140 to 1,204,000 _1109 Psest_1110: Psest_1110 - outer membrane lipoprotein LolB, at 1,204,001 to 1,204,621 _1110 Psest_1111: Psest_1111 - Flp pilus assembly protein TadD, contains TPR repeats, at 1,204,625 to 1,206,352 _1111
Group Condition Psest_1107 Psest_1108 Psest_1109 Psest_1110 Psest_1111
stress Choline Lysine 20 mM N.D. N.D. N.D. N.D. -2.8
stress Choline chloride 90 mM N.D. N.D. N.D. N.D. -2.7
stress acetate 80 mM N.D. N.D. N.D. N.D. -2.4
stress Choline chloride 90 mM N.D. N.D. N.D. N.D. -2.4
stress Cephalothin 0.04 mg/ml N.D. N.D. N.D. N.D. -2.3
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. N.D. N.D. N.D. -2.2
carbon source L-tyrosine (C) N.D. N.D. N.D. N.D. -2.1
RCH2 grown on a colony of Serratia N.D. N.D. N.D. N.D. -2.0
stress Choline Lysine 20 mM N.D. N.D. N.D. N.D. -2.0
RCH2 grown on a colony of N2C3 N.D. N.D. N.D. N.D. -2.0
nitrogen source Cytosine (N) N.D. N.D. N.D. N.D. -1.9
stress sodium fluoride 6.25 mM N.D. N.D. N.D. N.D. -1.7
RCH2 grown on a colony of N2F3 N.D. N.D. N.D. N.D. -1.7
carbon source D-Alanine (C) N.D. N.D. N.D. N.D. -1.7
nitrogen source D-Alanine (N) N.D. N.D. N.D. N.D. -1.6
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. N.D. N.D. N.D. -1.6
stress Benzethonium chloride 0.0125 mM N.D. N.D. N.D. N.D. -1.6
stress Doxycycline hyclate 0.0002 mg/ml N.D. N.D. N.D. N.D. -1.6
stress Def Carbenicillin 0.008 mg/ml N.D. N.D. N.D. N.D. -1.5
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. -1.5
carbon source D-Maltose (C) N.D. N.D. N.D. N.D. -1.5
temperature LB 30C timecourse1 timepoint 3 N.D. N.D. N.D. N.D. -1.5
temperature Glucose defined 30C timecourse1 timepoint 2 N.D. N.D. N.D. N.D. -1.5
temperature Glucose defined 30C timecourse1 timepoint 1 N.D. N.D. N.D. N.D. -1.5
stress nitrate 200 mM N.D. N.D. N.D. N.D. -1.4
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten N.D. N.D. N.D. N.D. -1.4
stress A22 0.005 mg/ml N.D. N.D. N.D. N.D. -1.4
carbon source Glucose defined media N.D. N.D. N.D. N.D. -1.4
carbon source pyruvate (C) N.D. N.D. N.D. N.D. -1.4
stress Bacitracin 0.25 mg/ml N.D. N.D. N.D. N.D. +1.5
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