Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_1100 and Psest_1101 are separated by 82 nucleotidesPsest_1101 and Psest_1102 are separated by 258 nucleotidesPsest_1102 and Psest_1103 are separated by 194 nucleotidesPsest_1103 and Psest_1104 are separated by 25 nucleotides Psest_1100: Psest_1100 - Type I site-specific restriction-modification system, R (restriction) subunit and related helicases, at 1,193,804 to 1,196,602 _1100 Psest_1101: Psest_1101 - Uncharacterized conserved protein, at 1,196,685 to 1,197,746 _1101 Psest_1102: Psest_1102 - Integrase, at 1,198,005 to 1,199,216 _1102 Psest_1103: Psest_1103 - GTP-binding protein YchF, at 1,199,411 to 1,200,511 _1103 Psest_1104: Psest_1104 - peptidyl-tRNA hydrolase, at 1,200,537 to 1,201,121 _1104
Group Condition Psest_1100 Psest_1101 Psest_1102 Psest_1103 Psest_1104
stress Choline chloride 90 mM -0.3 -0.2 -0.1 -3.9 N.D.
stress Choline chloride 90 mM -0.2 +0.0 +0.1 -4.1 N.D.
stress Choline Lysine 20 mM -0.2 -0.1 +0.1 -3.8 N.D.
stress Choline Lysine 20 mM -0.1 +0.1 +0.2 -4.1 N.D.
stress Fusidic 0.016 mg/ml -0.4 -0.5 -0.0 -2.0 N.D.
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.2 -0.3 -0.1 -2.7 N.D.
stress Furfuryl Alcohol 0.05 vol% -0.2 +0.2 -0.0 -2.8 N.D.
temperature LB 30C timecourse1 timepoint 1 -0.1 -0.5 +0.1 -2.1 N.D.
stress Paraquat dichloride 0.015 mg/ml +0.1 -0.2 +0.1 -2.5 N.D.
stress Carbenicillin 0.008 mg/ml -0.2 -0.5 +0.0 -1.9 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.2 -0.2 -0.1 -1.8 N.D.
stress D-Cycloserine 0.032 mg/ml -0.2 -0.4 +0.2 -1.8 N.D.
stress Def Chloride 400 mM -0.5 -0.1 +0.3 -1.8 N.D.
RCH2 grown on a colony of N2C3 +0.0 -0.3 +0.4 -2.2 N.D.
stress nitrate 200 mM -0.2 +0.5 +0.5 -2.7 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% -0.5 +0.6 -0.2 -1.8 N.D.
nitrogen source Putrescine (N) +0.1 -0.2 -0.4 -1.3 N.D.
RCH2 grown on a colony of N2A2 +0.2 +0.9 -0.1 -2.7 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample3 +0.4 -0.5 -0.1 -1.2 N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.0 +0.3 +0.3 -1.8 N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 +0.4 -0.5 -0.2 -0.9 N.D.
RCH2 grown on a colony of Serratia +0.1 +0.7 -0.1 -1.9 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample2 +0.6 -0.7 -0.4 -0.6 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample1 +0.7 -0.1 -0.0 -1.7 N.D.
stress Lactate-nitrate; anaerobic; cadmium stress sample1 +0.5 -0.6 -0.4 -0.6 N.D.
stress Doxycycline hyclate 0.0002 mg/ml -0.3 +0.4 +0.2 -1.1 N.D.
carbon source L-Glutamine (C) +0.2 +0.5 +0.0 -1.2 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample3 +0.4 -0.5 -0.4 +0.8 N.D.
carbon source L-tyrosine (C) -0.2 -0.0 -0.1 +1.8 N.D.
stress Nalidixic 0.00390625 mg/ml -0.2 -0.4 +0.4 +1.9 N.D.
remove
Psest_1100
plot		 remove
Psest_1101
plot		 remove
Psest_1102		 remove
Psest_1103
plot		 remove
Psest_1104
plot