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Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1097 and Psest_1098 overlap by 4 nucleotides
Psest_1098 and Psest_1099 are separated by 5 nucleotides
Psest_1099 and Psest_1100 are separated by 15 nucleotides
Psest_1100 and Psest_1101 are separated by 82 nucleotides
Psest_1097: Psest_1097 - hypothetical protein, at 1,188,631 to 1,190,463
_1097
Psest_1098: Psest_1098 - Restriction endonuclease S subunits, at 1,190,460 to 1,192,118
_1098
Psest_1099: Psest_1099 - Type I restriction-modification system methyltransferase subunit, at 1,192,124 to 1,193,788
_1099
Psest_1100: Psest_1100 - Type I site-specific restriction-modification system, R (restriction) subunit and related helicases, at 1,193,804 to 1,196,602
_1100
Psest_1101: Psest_1101 - Uncharacterized conserved protein, at 1,196,685 to 1,197,746
_1101
Group
Condition
Psest
_1097
Psest
_1098
Psest
_1099
Psest
_1100
Psest
_1101
stress
nitrate 250 mM
-0.7
-2.2
-1.3
-0.7
-0.4
stress
Def Carbenicillin 0.008 mg/ml
-0.5
-1.5
-0.8
-0.5
-0.4
stress
Cephalothin 0.04 mg/ml
-0.1
-1.2
-0.5
-0.6
-0.5
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.1
-1.1
-1.5
-0.4
+0.3
nitrogen source
L-Alanine (N)
+0.1
-0.9
-1.0
-0.3
-0.4
stress
Def Benzethonium chloride 0.008 mM
-0.2
-1.0
-0.4
-0.4
-0.5
stress
Chlorite 0.06 mM
+0.0
-0.9
-1.1
-0.3
+0.3
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.1
-0.8
-1.2
-0.5
+0.6
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
+0.8
+0.3
+0.4
+0.4
-0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample2
+0.5
+0.5
+0.5
+0.5
-0.7
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
+0.6
+0.6
+0.3
+0.5
-0.6
stress
Lactate-nitrate; anaerobic sample1
+0.7
+0.5
+0.4
+0.4
-0.6
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
+0.8
+0.4
+0.5
+0.6
-0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample3
+0.6
+0.4
+0.5
+0.4
-0.5
metal limitation
Lactate-nitrite; anaerobic; sample1
+0.6
+0.6
+0.4
+0.5
-0.6
metal limitation
Lactate-nitrite; anaerobic; with copper; sample3
+0.6
+0.4
+0.6
+0.4
-0.6
metal limitation
Lactate-nitrite; anaerobic; with copper; sample1
+0.7
+0.5
+0.6
+0.7
-0.7
metal limitation
Lactate; aerobic; with copper, sample2
+0.6
+0.4
+0.5
+0.6
-0.5
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
+0.6
+0.6
+0.5
+0.5
-0.6
carbon source
propionate (C)
+0.1
+0.8
+1.0
+0.3
-0.4
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
+0.8
+0.4
+0.7
+0.4
-0.5
metal limitation
Lactate-nitrite; anaerobic; sample3
+0.6
+0.4
+0.6
+0.7
-0.5
metal limitation
Lactate-nitrite with YE; anaerobic; sample1
+0.7
+0.5
+0.6
+0.6
-0.5
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
+0.6
+0.7
+0.6
+0.5
-0.6
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample3
+0.8
+0.3
+0.5
+0.7
-0.3
metal limitation
Lactate-nitrite; anaerobic; with copper; sample2
+0.6
+0.6
+0.5
+0.7
-0.5
stress
Lactate-nitrate; anaerobic sample2
+0.8
+0.4
+0.6
+0.6
-0.4
stress
Lactate-nitrate; anaerobic sample3
+0.8
+0.3
+0.7
+0.5
-0.3
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
+0.7
+0.5
+0.7
+0.8
-0.5
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
+0.7
+0.5
+0.6
+0.6
-0.2
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