Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1069 and Psest_1070 are separated by 140 nucleotidesPsest_1070 and Psest_1071 are separated by 111 nucleotidesPsest_1071 and Psest_1072 are separated by 76 nucleotidesPsest_1072 and Psest_1073 are separated by 16 nucleotides Psest_1069: Psest_1069 - Protease II, at 1,156,275 to 1,158,104 _1069 Psest_1070: Psest_1070 - Predicted membrane protein, at 1,158,245 to 1,158,643 _1070 Psest_1071: Psest_1071 - Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains, at 1,158,755 to 1,160,254 _1071 Psest_1072: Psest_1072 - TRAP transporter, DctM subunit, at 1,160,331 to 1,161,701 _1072 Psest_1073: Psest_1073 - TRAP-type mannitol/chloroaromatic compound transport system, small permease component, at 1,161,718 to 1,162,320 _1073
Group Condition Psest_1069 Psest_1070 Psest_1071 Psest_1072 Psest_1073
stress Def A22 0.015 mg/ml -0.6 -1.1 -0.7 -0.5 -0.8
carbon source L-tyrosine (C) -0.1 -0.2 -3.5 +0.2 +0.1
nitrogen source L-Isoleucine (N) +0.4 -2.2 -0.6 -0.8 -0.4
stress Def Phosphomycin 0.125 mg/ml -0.4 -1.2 -1.0 -0.6 -0.3
carbon source L-tyrosine (C) +0.3 -0.4 -4.0 +0.2 +0.5
nitrogen source nitrite (N) -0.1 -0.4 -0.4 -0.6 -0.8
RCH2 grown on a colony of N2F3 -0.5 +0.4 -1.4 -0.0 -0.3
stress Def Carbenicillin 0.008 mg/ml +0.1 -0.9 +0.3 -1.0 -0.5
stress Def Cephalothin 0.08 mg/ml +0.1 -1.0 -0.8 -0.3 +0.2
carbon source propionate (C) -0.3 -0.9 +0.2 -0.1 -0.7
lb LB -0.3 +0.4 -0.6 -0.2 -1.0
stress 2-Furfuraldehyde 0.05 vol% +0.1 -0.2 -0.7 +0.3 -0.9
nitrogen source Cytosine (N) -0.2 -1.0 +0.1 -0.4 +0.5
RCH2 grown on a colony of Serratia -0.0 -1.4 -0.5 +0.3 +0.7
nutrient Min media with glucose +0.4 +0.5 -0.3 -0.1 -0.9
stress Nalidixic 0.00390625 mg/ml +0.5 +0.8 -0.3 -0.1 -0.4
RCH2 grown on a colony of ecoli -0.3 +0.3 -0.7 +0.7 +0.5
stress Lactate-nitrate; anaerobic sample3 +0.6 -0.6 +0.2 +0.3 +0.4
stress Gentamicin 0.0016 mg/ml +0.6 +0.8 +0.4 -0.3 -0.1
RCH2 grown on a colony of N2A2 +0.3 +0.2 -0.3 +0.1 +1.5
stress Polymyxin B sulfate 0.0001 mg/ml -0.2 +0.7 +0.8 +0.3 +0.4
stress Def Chloride 400 mM -0.1 +1.0 +0.6 +0.5 +0.1
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.6 +0.8 +0.5 +0.2 +0.1
stress Benzethonium chloride 0.01 mM +0.3 +0.8 +0.4 +0.1 +0.6
temperature LB 30C timecourse2 timepoint 2 +0.4 +0.4 +0.6 +0.5 +0.4
RCH2 grown on a colony of N2C3 -0.3 +1.3 +0.5 +0.3 +0.5
stress Def Thallium(I) acetate 0.125 mg/ml +0.4 +0.6 +0.3 +0.8 +0.2
temperature LB 30C timecourse1 timepoint 3 +0.5 +0.9 +0.4 +0.4 +0.2
stress Cephalothin 0.04 mg/ml +0.6 +1.5 +0.2 -0.2 +0.5
stress Chlorate 75 mM +0.8 +0.1 +2.2 +0.4 +1.0
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