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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1067 and Psest_1068 are separated by 124 nucleotides
Psest_1068 and Psest_1069 are separated by 274 nucleotides
Psest_1069 and Psest_1070 are separated by 140 nucleotides
Psest_1070 and Psest_1071 are separated by 111 nucleotides
Psest_1067: Psest_1067 - hypothetical protein, at 1,154,452 to 1,154,613
_1067
Psest_1068: Psest_1068 - outer membrane porin, OprD family., at 1,154,738 to 1,156,000
_1068
Psest_1069: Psest_1069 - Protease II, at 1,156,275 to 1,158,104
_1069
Psest_1070: Psest_1070 - Predicted membrane protein, at 1,158,245 to 1,158,643
_1070
Psest_1071: Psest_1071 - Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains, at 1,158,755 to 1,160,254
_1071
Group
Condition
Psest
_1067
Psest
_1068
Psest
_1069
Psest
_1070
Psest
_1071
carbon source
L-tyrosine (C)
-0.7
-0.1
+0.3
-0.4
-4.0
carbon source
L-tyrosine (C)
-0.5
+0.4
-0.1
-0.2
-3.5
stress
Def A22 0.015 mg/ml
-0.4
-0.2
-0.6
-1.1
-0.7
stress
Def Phosphomycin 0.125 mg/ml
-0.0
-0.1
-0.4
-1.2
-1.0
nitrogen source
L-Isoleucine (N)
+0.0
-0.2
+0.4
-2.2
-0.6
stress
Def Cephalothin 0.08 mg/ml
-0.2
-0.0
+0.1
-1.0
-0.8
RCH2 grown on a colony of N2F3
-0.1
-0.0
-0.5
+0.4
-1.4
stress
Furfuryl Alcohol 0.05 vol%
-1.0
+0.1
+0.1
+0.1
-0.6
RCH2 grown on a colony of Serratia
+0.6
+0.1
-0.0
-1.4
-0.5
carbon source
propionate (C)
+0.3
-0.6
-0.3
-0.9
+0.2
stress
Cisplatin 0.0016 mg/ml
+0.6
-0.1
-0.2
-0.9
+0.2
stress
Def Carbenicillin 0.008 mg/ml
+0.8
-0.3
+0.1
-0.9
+0.3
RCH2 grown on a colony of 8R2A
-0.8
+0.2
+0.4
+0.6
-0.3
RCH2 grown on a colony of N2F3
+1.5
-0.3
-0.4
-0.1
-0.4
stress
1-ethyl-3-methylimidazolium acetate 40 mM
-0.3
+0.2
-0.5
+0.9
+0.1
nutrient
L-Histidine
+0.9
+0.1
+0.3
-0.5
-0.3
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.5
+0.2
-0.2
+0.7
+0.8
RCH2 grown on a colony of N2C3
-0.4
+0.1
-0.3
+1.3
+0.5
stress
Nalidixic 0.00390625 mg/ml
-0.0
+0.4
+0.5
+0.8
-0.3
stress
Benzethonium chloride 0.01 mM
-0.3
+0.3
+0.3
+0.8
+0.4
RCH2 grown on a colony of Serratia
+1.4
-0.2
+0.4
-0.1
+0.1
stress
Def Chloride 400 mM
+0.5
-0.1
-0.1
+1.0
+0.6
carbon source
RCH2 defined media
+1.0
+0.1
+0.3
+0.4
+0.3
stress
Gentamicin 0.0016 mg/ml
+0.2
+0.1
+0.6
+0.8
+0.4
temperature
LB 30C timecourse1 timepoint 3
+0.1
+0.3
+0.5
+0.9
+0.4
stress
A22 0.005 mg/ml
+0.4
+0.2
+0.5
+0.5
+0.5
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.9
+0.1
+0.4
+0.6
+0.3
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.5
+0.1
+0.6
+0.8
+0.5
stress
Cephalothin 0.04 mg/ml
+1.0
-0.1
+0.6
+1.5
+0.2
stress
Chlorate 75 mM
+0.3
+1.0
+0.8
+0.1
+2.2
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