Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1038 and Psest_1039 are separated by 153 nucleotidesPsest_1039 and Psest_1040 are separated by 54 nucleotidesPsest_1040 and Psest_1041 overlap by 1 nucleotidesPsest_1041 and Psest_1042 are separated by 17 nucleotides Psest_1038: Psest_1038 - ketol-acid reductoisomerase, at 1,123,817 to 1,124,833 _1038 Psest_1039: Psest_1039 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 1,124,987 to 1,125,826 _1039 Psest_1040: Psest_1040 - Sulfite oxidase and related enzymes, at 1,125,881 to 1,126,888 _1040 Psest_1041: Psest_1041 - Predicted membrane protein, at 1,126,888 to 1,127,508 _1041 Psest_1042: Psest_1042 - hypothetical protein, at 1,127,526 to 1,127,966 _1042
Group Condition Psest_1038 Psest_1039 Psest_1040 Psest_1041 Psest_1042
stress Gentamicin 0.0016 mg/ml N.D. N.D. -1.3 -1.4 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. N.D. -0.6 -1.0 N.D.
stress Def Benzethonium chloride 0.008 mM N.D. N.D. -0.5 -0.9 N.D.
stress Def Carbenicillin 0.008 mg/ml N.D. N.D. -0.3 -1.0 N.D.
stress Fusidic 0.016 mg/ml N.D. N.D. -0.4 -0.8 N.D.
carbon source RCH2 defined media N.D. N.D. -0.4 -0.7 N.D.
stress Cephalothin 0.04 mg/ml N.D. N.D. -0.2 -0.9 N.D.
carbon source L-Lactate (C) N.D. N.D. -0.3 -0.7 N.D.
stress nitrate 250 mM N.D. N.D. +0.0 -0.9 N.D.
stress Choline Lysine 20 mM N.D. N.D. -0.5 -0.4 N.D.
stress Spectinomycin 0.00625 mg/ml N.D. N.D. -0.5 -0.3 N.D.
stress Choline Lysine 20 mM N.D. N.D. -0.4 -0.5 N.D.
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. N.D. -0.3 -0.5 N.D.
stress Def Chlorate 40 mM N.D. N.D. -0.5 -0.3 N.D.
stress Lactate-nitrate; anaerobic sample3 N.D. N.D. -0.2 -0.5 N.D.
stress Paraquat dichloride 0.015 mg/ml N.D. N.D. -0.4 -0.3 N.D.
metal limitation Lactate; aerobic; with copper, sample1 N.D. N.D. +0.1 -0.6 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample1 N.D. N.D. +0.2 -0.6 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample1 N.D. N.D. +0.2 -0.5 N.D.
carbon source butyrate (C) N.D. N.D. +0.2 -0.4 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample3 N.D. N.D. +0.3 -0.4 N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 N.D. N.D. +0.3 -0.4 N.D.
nitrogen source nitrite (N) N.D. N.D. +0.4 -0.4 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample2 N.D. N.D. +0.4 -0.3 N.D.
stress Lactate-nitrate; anaerobic; cadmium stress sample3 N.D. N.D. +0.5 -0.3 N.D.
RCH2 grown on a colony of 8R2A N.D. N.D. +0.6 -0.2 N.D.
carbon source L-Glutamine (C) N.D. N.D. +0.5 +0.1 N.D.
carbon source L-Glutamine (C) N.D. N.D. +0.6 +0.1 N.D.
stress Nalidixic 0.00390625 mg/ml N.D. N.D. +0.5 +0.3 N.D.
RCH2 grown on a colony of N2C3 N.D. N.D. +0.6 +0.3 N.D.
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