Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS24325 and EX31_RS24330 are separated by 376 nucleotidesEX31_RS24330 and EX31_RS24335 are separated by 228 nucleotidesEX31_RS24335 and EX31_RS24340 are separated by 67 nucleotidesEX31_RS24340 and EX31_RS24345 are separated by 64 nucleotides EX31_RS24325: EX31_RS24325 - LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee, at 630,097 to 631,032 _RS24325 EX31_RS24330: EX31_RS24330 - NADH:flavin oxidoreductase/NADH oxidase, at 631,409 to 632,506 _RS24330 EX31_RS24335: EX31_RS24335 - rhodanese-related sulfurtransferase, at 632,735 to 633,790 _RS24335 EX31_RS24340: EX31_RS24340 - YceI family protein, at 633,858 to 634,433 _RS24340 EX31_RS24345: EX31_RS24345 - cytochrome b, at 634,498 to 635,043 _RS24345
Group Condition EX31_RS24325 EX31_RS24330 EX31_RS24335 EX31_RS24340 EX31_RS24345
nf_with_fulln NF_with_fullN -2.2 -0.2 +0.0 -0.2 +0.1
nf_with_fulln NF_with_fullN -1.6 +0.0 -0.1 -0.3 -0.5
nitrogen source L-Glutamine (N); ShewMM media; shaking -1.3 +0.0 -0.2 -0.3 -0.4
nf_with_fulln NF_with_fullN -1.4 -0.2 -0.1 -0.5 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -1.7 -0.0 -0.2 -0.0 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.7 +0.0 -0.1 -0.6 -0.7
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 -0.3 -0.2 +0.0 -1.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -2.4 +0.2 -0.0 +0.1 +0.3
carbon source D-Mannitol (C) -0.9 -0.2 +0.0 -0.4 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.7 -0.2 -0.2 -0.0 -0.5
nf_with10percent_fulln NF_with10percent_fullN -0.8 -0.2 -0.0 -0.2 -0.4
nf_with_fulln NF_with_fullN -1.3 -0.1 -0.0 -0.1 -0.1
mgl MGL -1.8 +0.1 -0.2 -0.0 +0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 +0.2 -0.3 -0.5 -0.3
nl-ccm; high oxygen NL-CCM; high oxygen -1.2 -0.2 +0.1 +0.1 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.4 -0.3 -0.1 -0.5 -0.7
mgl MGL -1.0 -0.1 -0.2 +0.1 +0.0
carbon source casaminos (C) -1.5 -0.2 -0.0 -0.2 +0.8
mgl MGL -1.1 -0.2 -0.1 -0.0 +0.5
carbon source NLDM_metabolites (C) -0.6 +0.3 -0.1 -0.1 -0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking -1.0 +0.0 -0.1 -0.2 +0.6
carbon source D,L-Lactate (C) -1.0 -0.3 -0.2 +0.3 +0.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.8 +0.2 -0.1 -0.1 +0.2
mgl MGL -1.0 +0.2 +0.0 +0.5 -0.3
nf_with10percent_fulln NF_with10percent_fullN -1.0 +0.1 +0.1 +0.1 +0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.6 +0.1 +0.2 +0.2 -0.4
carbon source casaminos (C) -1.3 +0.4 +0.2 +0.5 +0.8
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.7 +0.0 -0.2 +0.4 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.7 +0.0 -0.0 -0.5 +0.5
carbon source D-Xylose (C) +1.1 -0.0 -0.2 +0.3 +0.2
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EX31_RS24325
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EX31_RS24330
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EX31_RS24345
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