Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS24185 and EX31_RS24190 are separated by 4 nucleotidesEX31_RS24190 and EX31_RS24195 are separated by 177 nucleotidesEX31_RS24195 and EX31_RS24200 are separated by 124 nucleotidesEX31_RS24200 and EX31_RS24205 are separated by 51 nucleotides EX31_RS24185: EX31_RS24185 - DNA-binding transcriptional repressor DeoR, at 606,473 to 607,237 _RS24185 EX31_RS24190: EX31_RS24190 - DNA gyrase inhibitor, at 607,242 to 607,718 _RS24190 EX31_RS24195: EX31_RS24195 - membrane protein, at 607,896 to 608,405 _RS24195 EX31_RS24200: EX31_RS24200 - hypothetical protein, at 608,530 to 608,805 _RS24200 EX31_RS24205: EX31_RS24205 - hypothetical protein, at 608,857 to 609,117 _RS24205
Group Condition EX31_RS24185 EX31_RS24190 EX31_RS24195 EX31_RS24200 EX31_RS24205
nf_with_fulln NF_with_fullN -0.4 -0.0 -0.1 -0.6 -0.6
nln NLN -0.6 +0.2 -0.1 -0.3 -0.9
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 +0.2 -0.1 -0.6 -0.6
nf_with_fulln NF_with_fullN -0.6 +0.2 -0.1 -0.5 -0.4
nln NLN -0.5 +0.2 -0.0 -0.3 -0.5
nf_with_fulln NF_with_fullN -0.5 +0.2 -0.1 -0.4 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.5 -0.4 -0.3 +0.1 +0.3
mgl MGL -0.5 +0.2 -0.0 -0.3 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.6 +0.2 +0.0 -0.1 -0.3
mgl MGL -0.9 +0.2 -0.1 -0.0 +0.0
nf_with_fulln NF_with_fullN -0.6 +0.2 +0.1 -0.5 +0.2
nf_with_fulln NF_with_fullN -0.8 +0.4 +0.1 -0.2 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 +0.3 +0.0 -0.5 -0.5
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.3 -0.2 -0.2 -0.6
nitrogen source L-Serine (N); RCH2 media; no shaking -0.0 +0.5 +0.0 +0.0 -1.0
carbon source D,L-Lactate (C) +0.3 +0.3 +0.0 -0.6 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.4 +0.5 +0.1 +0.4 -0.7
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.4 +0.5 -0.1 -0.1 +0.3
carbon source NLDM_metabolites (C) +0.4 -0.6 +0.3 -0.3 +0.4
nitrogen source L-Serine (N); RCH2 media; shaking -0.5 +0.5 -0.1 +0.3 +0.1
nl-ccm_agar NL-CCM_agar -0.3 -0.1 -0.1 +0.3 +0.6
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 +0.2 +0.1 -0.1 +0.6
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.6 -0.0 +0.3 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 +0.5 -0.2 +0.4 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.2 -0.1 +0.3 +0.7
carbon source casaminos (C) -0.1 -0.1 +0.3 +0.4 +0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.8 -0.2 +0.4 -0.3
mgl MGL -0.5 +0.7 +0.0 +0.2 +0.7
carbon source D,L-Lactate (C) +0.4 -0.0 +0.3 +0.4 +0.4
carbon source NLDM_metabolites (C) +0.1 +1.0 +0.4 +0.1 +0.3
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