Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS24145 and EX31_RS24150 overlap by 29 nucleotidesEX31_RS24150 and EX31_RS24155 are separated by 56 nucleotidesEX31_RS24155 and EX31_RS24160 are separated by 148 nucleotidesEX31_RS24160 and EX31_RS24165 are separated by 58 nucleotides EX31_RS24145: EX31_RS24145 - UvrY/SirA/GacA family response regulator transcription factor, at 601,429 to 602,085 _RS24145 EX31_RS24150: EX31_RS24150 - excinuclease ABC subunit UvrC, at 602,057 to 603,913 _RS24150 EX31_RS24155: EX31_RS24155 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 603,970 to 604,518 _RS24155 EX31_RS24160: EX31_RS24160 - tRNA-Gly, at 604,667 to 604,742 _RS24160 EX31_RS24165: EX31_RS24165 - tRNA-Cys, at 604,801 to 604,874 _RS24165
Group Condition EX31_RS24145 EX31_RS24150 EX31_RS24155 EX31_RS24160 EX31_RS24165
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.9 -0.1 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -1.0 +0.1 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.9 +0.1 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.8 +0.1 N.D. N.D. N.D.
nl-ccm; low oxygen NL-CCM; low oxygen -0.9 +0.2 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.7 +0.1 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.7 +0.1 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.6 +0.1 N.D. N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.8 +0.2 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.8 +0.3 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.7 +0.2 N.D. N.D. N.D.
nl-ccm; low oxygen NL-CCM; low oxygen -0.6 +0.1 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.7 +0.2 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.7 +0.2 N.D. N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen -0.5 +0.3 N.D. N.D. N.D.
carbon source D-Xylose (C) +0.4 -0.3 N.D. N.D. N.D.
carbon source NLDM_metabolites (C) +0.7 -0.4 N.D. N.D. N.D.
nl-ccm; vial NL-CCM; vial +0.6 -0.1 N.D. N.D. N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.8 -0.2 N.D. N.D. N.D.
nl-ccm; vial NL-CCM; vial +0.8 -0.1 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.7 +0.1 N.D. N.D. N.D.
nl-ccm NL-CCM +0.6 +0.1 N.D. N.D. N.D.
nl-ccm NL-CCM +0.7 +0.1 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.8 +0.0 N.D. N.D. N.D.
nl-ccm_agar NL-CCM_agar +0.6 +0.3 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.7 +0.2 N.D. N.D. N.D.
nl-ccm_agar NL-CCM_agar +0.7 +0.3 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.7 +0.3 N.D. N.D. N.D.
nl-ccm_agar NL-CCM_agar +0.8 +0.3 N.D. N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.8 +0.2 N.D. N.D. N.D.
remove
EX31_RS24145
plot		 remove
EX31_RS24150
plot		 remove
EX31_RS24155		 remove
EX31_RS24160
plot		 remove
EX31_RS24165
plot