Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS24005 and EX31_RS24010 are separated by 27 nucleotidesEX31_RS24010 and EX31_RS24015 are separated by 603 nucleotidesEX31_RS24015 and EX31_RS24020 are separated by 11 nucleotidesEX31_RS24020 and EX31_RS24025 are separated by 320 nucleotides EX31_RS24005: EX31_RS24005 - helix-turn-helix transcriptional regulator, at 568,554 to 569,123 _RS24005 EX31_RS24010: EX31_RS24010 - GNAT family N-acetyltransferase, at 569,151 to 569,687 _RS24010 EX31_RS24015: EX31_RS24015 - ABC transporter permease, at 570,291 to 571,286 _RS24015 EX31_RS24020: EX31_RS24020 - ATP-binding cassette domain-containing protein, at 571,298 to 572,779 _RS24020 EX31_RS24025: EX31_RS24025 - VOC family protein, at 573,100 to 573,960 _RS24025
Group Condition EX31_RS24005 EX31_RS24010 EX31_RS24015 EX31_RS24020 EX31_RS24025
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.3 -0.5 -0.2 -0.2 -0.4
carbon source NLDM_metabolites (C) +0.4 -1.0 +0.2 -0.5 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 -0.5 +0.0 -0.4 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 -0.8 -0.2 +0.1 -0.0
carbon source casaminos (C) +0.3 -0.7 -0.0 -0.2 -0.4
carbon source casaminos (C) -0.2 -0.4 +0.0 -0.1 -0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 -0.2 +0.0 -0.2 -0.7
carbon source Sucrose (C) +0.1 -1.3 +0.1 -0.0 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.3 -0.6 +0.1 -0.2 +0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 -0.5 +0.1 -0.0 -0.4
carbon source Sucrose (C) +0.2 -0.3 +0.2 -0.4 -0.3
nf_with_fulln NF_with_fullN +0.3 -0.6 -0.0 -0.3 +0.0
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 -0.1 +0.3 +0.0 -0.7
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.5 -0.1 -0.2 -0.3
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 -0.6 +0.0 +0.3 +0.3
carbon source D-Mannitol (C) +0.2 -0.4 +0.3 -0.0 -0.2
nl-ccm NL-CCM -0.0 +0.4 -0.1 +0.0 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 +0.3 +0.0 -0.3 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.2 -0.3 +0.3 -0.0 +0.3
carbon source D-Mannitol (C) +0.2 -0.5 +0.1 -0.2 +0.4
mgl MGL +0.1 +0.6 +0.0 -0.2 -0.5
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 +0.3 +0.4 +0.1 -0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.0 +0.3 -0.1 -0.2 +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 +0.0 +0.3 -0.2 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 +0.5 +0.2 -0.2 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 +0.4 +0.2 +0.0 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 +0.6 +0.3 -0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.5 +0.3 -0.2 -0.1 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.5 +0.2 -0.1 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.6 +0.7 +0.0 +0.0 +0.2
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EX31_RS24005
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EX31_RS24010
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EX31_RS24025
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