Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS23635 and EX31_RS23640 are separated by 170 nucleotidesEX31_RS23640 and EX31_RS23645 are separated by 254 nucleotidesEX31_RS23645 and EX31_RS23650 are separated by 82 nucleotidesEX31_RS23650 and EX31_RS23655 are separated by 122 nucleotides EX31_RS23635: EX31_RS23635 - pyridoxal phosphatase, at 490,724 to 491,545 _RS23635 EX31_RS23640: EX31_RS23640 - 6-phosphogluconolactonase, at 491,716 to 492,714 _RS23640 EX31_RS23645: EX31_RS23645 - HAMP domain-containing protein, at 492,969 to 494,480 _RS23645 EX31_RS23650: EX31_RS23650 - putative acyl-CoA thioester hydrolase, at 494,563 to 495,843 _RS23650 EX31_RS23655: EX31_RS23655 - kinase inhibitor, at 495,966 to 496,448 _RS23655
Group Condition EX31_RS23635 EX31_RS23640 EX31_RS23645 EX31_RS23650 EX31_RS23655
carbon source Sucrose (C) +0.1 -1.4 +0.1 +0.0 -0.3
carbon source D-Xylose (C) -0.1 -1.2 -0.1 -0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 -0.7 +0.2 -0.1 -0.7
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.9 -0.1 -0.3 -0.0
carbon source D-Mannitol (C) -0.0 -0.5 +0.1 +0.0 -0.7
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.0 -0.9 +0.1 -0.2 -0.0
carbon source D-Mannitol (C) -0.1 -0.5 +0.1 -0.2 -0.3
nln NLN -0.1 -0.3 +0.0 -0.1 -0.5
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 -0.7 +0.0 -0.3 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -1.0 +0.2 -0.1 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.4 -0.1 -0.3 -0.1
nf_with_fulln NF_with_fullN +0.2 -0.5 +0.2 -0.2 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.0 -0.5 +0.1 -0.2 +0.0
carbon source D-Xylose (C) -0.1 -0.7 +0.2 -0.1 +0.1
nf_with_fulln NF_with_fullN +0.2 -0.2 +0.0 -0.1 -0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.2 -0.4 +0.0 -0.1 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.0 -0.4 +0.0 -0.2 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.5 +0.1 -0.2 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.2 -0.1 -0.1 -0.3
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.0 -0.5 +0.1 -0.1 +0.1
nf_with_fulln NF_with_fullN +0.1 -0.6 +0.1 -0.1 +0.1
nf_with_fulln NF_with_fullN +0.2 -0.3 +0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.3 +0.0 -0.3 +0.2
nf_with_fulln NF_with_fullN -0.0 -0.3 +0.2 -0.2 +0.1
carbon source Sucrose (C) +0.1 -0.7 +0.1 +0.0 +0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.2 -0.1 -0.2 +0.3
carbon source casaminos (C) -0.2 +0.1 +0.1 +0.2 -0.2
carbon source NLDM_metabolites (C) -0.1 +0.7 +0.1 -0.2 -0.3
mgl MGL +0.1 +0.4 -0.0 +0.2 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 +0.6 +0.1 -0.0 +0.1
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EX31_RS23635
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EX31_RS23640
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EX31_RS23655
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