Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS23445 and EX31_RS23450 are separated by 92 nucleotidesEX31_RS23450 and EX31_RS23455 overlap by 1 nucleotidesEX31_RS23455 and EX31_RS23460 are separated by 723 nucleotidesEX31_RS23460 and EX31_RS23465 are separated by 14 nucleotides EX31_RS23445: EX31_RS23445 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 457,230 to 458,459 _RS23445 EX31_RS23450: EX31_RS23450 - ADP-forming succinate--CoA ligase subunit beta, at 458,552 to 459,718 _RS23450 EX31_RS23455: EX31_RS23455 - succinate--CoA ligase subunit alpha, at 459,718 to 460,590 _RS23455 EX31_RS23460: EX31_RS23460 - cytochrome ubiquinol oxidase subunit I, at 461,314 to 462,882 _RS23460 EX31_RS23465: EX31_RS23465 - cytochrome d ubiquinol oxidase subunit II, at 462,897 to 464,036 _RS23465
Group Condition EX31_RS23445 EX31_RS23450 EX31_RS23455 EX31_RS23460 EX31_RS23465
carbon source casaminos (C) N.D. -3.5 -3.1 +0.2 +0.3
carbon source casaminos (C) N.D. -1.7 -2.8 -0.2 +0.2
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -0.9 -1.4 -1.0 -0.2
mgl MGL N.D. -0.4 -0.9 -1.0 -1.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.8 -1.6 -0.4 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking N.D. -0.7 -1.8 -0.3 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.7 -0.8 -0.5 -0.6
carbon source D,L-Lactate (C) N.D. -0.8 -1.1 -0.4 -0.3
mgl MGL N.D. -0.2 -0.3 -1.0 -1.1
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -1.4 -0.5 -0.4 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.7 -0.8 -0.5 -0.3
mgl MGL N.D. -0.0 -0.4 -1.0 -0.8
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. -1.1 -0.9 -0.2 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking N.D. -1.1 -0.8 -0.2 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.8 -0.9 -0.4 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -0.6 -1.1 -0.1 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking N.D. -0.6 -0.7 -0.6 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.7 -0.8 -0.4 -0.1
carbon source NLDM_metabolites (C) N.D. +0.3 -0.0 -1.3 -1.0
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.3 -1.3 -0.4 +0.1
mgl MGL N.D. -0.3 -0.5 -0.7 -0.5
carbon source NLDM_metabolites (C) N.D. +0.3 -0.0 -1.1 -1.1
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -0.6 -1.0 -0.2 +0.3
mgl MGL N.D. +0.2 +0.2 -1.3 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. -0.1 -0.2 +1.1 +1.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.0 +0.2 +1.0 +1.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.4 +0.1 +0.9 +1.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. -0.1 +0.2 +1.0 +1.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.3 +0.3 +1.1 +1.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen N.D. +0.3 +0.2 +1.0 +1.3
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EX31_RS23445
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EX31_RS23450
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EX31_RS23460
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EX31_RS23465
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