Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS22900 and EX31_RS22905 are separated by 212 nucleotidesEX31_RS22905 and EX31_RS22910 are separated by 466 nucleotidesEX31_RS22910 and EX31_RS22915 overlap by 4 nucleotidesEX31_RS22915 and EX31_RS22920 are separated by 62 nucleotides EX31_RS22900: EX31_RS22900 - WYL domain-containing protein, at 334,781 to 335,486 _RS22900 EX31_RS22905: EX31_RS22905 - GTPase family protein, at 335,699 to 336,574 _RS22905 EX31_RS22910: EX31_RS22910 - AAA family ATPase, at 337,041 to 338,792 _RS22910 EX31_RS22915: EX31_RS22915 - ATP-dependent helicase, at 338,789 to 340,564 _RS22915 EX31_RS22920: EX31_RS22920 - NTPase KAP, at 340,627 to 342,504 _RS22920
Group Condition EX31_RS22900 EX31_RS22905 EX31_RS22910 EX31_RS22915 EX31_RS22920
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.1 -0.1 -0.1 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 -0.1 +0.0 +0.0 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.3 +0.1 +0.0 +0.1 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.2 +0.1 -0.0 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 +0.4 +0.0 -0.0 -0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.2 +0.2 -0.1 +0.0 +0.0
carbon source D,L-Lactate (C) -0.3 +0.2 +0.2 +0.1 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.3 +0.2 +0.1 -0.0 +0.0
carbon source NLDM_metabolites (C) -0.4 +0.3 -0.1 +0.1 +0.2
nl-ccm NL-CCM -0.2 +0.2 +0.0 +0.0 -0.0
carbon source casaminos (C) -0.2 -0.0 +0.2 +0.2 +0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.4 +0.3 +0.0 +0.1 +0.1
carbon source D-Glucose (C) -0.2 +0.2 +0.1 +0.0 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.3 +0.3 +0.1 +0.1 -0.0
carbon source D-Mannitol (C) +0.0 +0.4 -0.1 -0.1 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 +0.3 +0.0 +0.0 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 +0.2 -0.1 +0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.2 +0.1 +0.0 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 +0.3 -0.0 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 +0.3 -0.1 +0.1 +0.1
nl-ccm; vial NL-CCM; vial +0.2 -0.1 +0.0 +0.2 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.2 -0.1 +0.1 +0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.3 -0.1 +0.2 -0.0
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.2 +0.2 +0.0 +0.1 -0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.2 +0.2 -0.1 +0.2 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 +0.4 +0.2 +0.0 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 +0.1 +0.0 +0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.0 +0.4 +0.1 -0.0 +0.0
mgl MGL +0.1 +0.2 +0.0 +0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.4 -0.0 +0.0 -0.0
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