Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS22725 and EX31_RS22730 are separated by 74 nucleotidesEX31_RS22730 and EX31_RS22735 are separated by 25 nucleotidesEX31_RS22735 and EX31_RS22740 are separated by 145 nucleotidesEX31_RS22740 and EX31_RS22745 are separated by 16 nucleotides EX31_RS22725: EX31_RS22725 - AI-2E family transporter, at 305,268 to 306,332 _RS22725 EX31_RS22730: EX31_RS22730 - thioredoxin-dependent thiol peroxidase, at 306,407 to 306,874 _RS22730 EX31_RS22735: EX31_RS22735 - glycine cleavage system transcriptional repressor, at 306,900 to 307,466 _RS22735 EX31_RS22740: EX31_RS22740 - 4-hydroxy-tetrahydrodipicolinate synthase, at 307,612 to 308,493 _RS22740 EX31_RS22745: EX31_RS22745 - outer membrane protein assembly factor BamC, at 308,510 to 309,589 _RS22745
Group Condition EX31_RS22725 EX31_RS22730 EX31_RS22735 EX31_RS22740 EX31_RS22745
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.2 +0.1 -0.9 -1.6 -0.8
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.1 -1.0 -1.7 -0.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 -0.2 -1.0 -1.4 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.4 -0.2 -0.6 -1.4 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 +0.2 -0.9 -1.8 -0.5
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.0 +0.1 -0.9 -1.5 -0.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.1 -0.9 -1.8 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.0 -0.2 -0.9 -1.5 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 -0.1 -0.6 -1.7 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 +0.0 -0.7 -1.5 -0.5
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 +0.1 -0.8 -1.4 -0.5
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 +0.0 -0.7 -1.3 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.0 -0.5 -1.6 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 -0.0 -0.6 -1.2 -0.6
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 +0.1 -0.4 -1.3 -0.6
carbon source NLDM_metabolites (C) -0.2 +0.1 -0.5 -1.0 -0.7
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 -0.1 -0.7 -1.2 -0.4
carbon source Sucrose (C) +0.0 -0.5 -0.3 -1.1 -0.5
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 +0.0 -0.6 -1.3 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.3 +0.3 -1.6 -0.5
carbon source NLDM_metabolites (C) -0.3 +0.1 -0.1 -1.6 -0.4
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.0 -0.4 -1.7 -0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 +0.2 -0.6 -1.1 -0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.4 -0.4 -1.8 -0.5
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 +0.1 +0.1 -1.7 -0.5
nitrogen source L-Serine (N); RCH2 media; shaking -0.0 -0.2 +0.3 -1.8 -0.4
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.3 -0.6 -1.1 -0.5
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.2 +0.5 -1.7 -0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.0 +0.1 +0.3 -1.5 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.0 +0.5 -1.4 -0.5
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EX31_RS22725
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EX31_RS22730
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EX31_RS22745
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