Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS22205 and EX31_RS22210 overlap by 1 nucleotidesEX31_RS22210 and EX31_RS22215 overlap by 11 nucleotidesEX31_RS22215 and EX31_RS22220 are separated by 3 nucleotidesEX31_RS22220 and EX31_RS22225 are separated by 433 nucleotides EX31_RS22205: EX31_RS22205 - cytochrome o ubiquinol oxidase subunit IV, at 189,680 to 190,012 _RS22205 EX31_RS22210: EX31_RS22210 - cytochrome o ubiquinol oxidase subunit III, at 190,012 to 190,626 _RS22210 EX31_RS22215: EX31_RS22215 - cytochrome o ubiquinol oxidase subunit I, at 190,616 to 192,607 _RS22215 EX31_RS22220: EX31_RS22220 - cytochrome o ubiquinol oxidase subunit II, at 192,611 to 193,570 _RS22220 EX31_RS22225: EX31_RS22225 - muropeptide MFS transporter AmpG, at 194,004 to 195,482 _RS22225
Group Condition EX31_RS22205 EX31_RS22210 EX31_RS22215 EX31_RS22220 EX31_RS22225
carbon source D,L-Lactate (C) -1.8 -1.5 -1.3 -1.8 -0.0
carbon source D,L-Lactate (C) -1.1 -1.5 -1.2 -1.5 -0.0
carbon source casaminos (C) -1.4 -1.4 -1.2 -1.2 -0.1
carbon source casaminos (C) -1.1 -1.4 -1.3 -1.1 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.7 -0.6 -0.5 -0.6 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.7 -0.5 -0.6 -0.7 +0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.6 -0.6 -0.4 -0.4 -0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.6 -0.4 -0.4 -0.5 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.4 -0.7 -0.5 -0.4 +0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.6 +0.6 +0.3 +0.5 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.4 +0.8 +0.6 +0.2 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.5 +0.6 +0.5 +0.4 +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.5 +0.7 +0.5 +0.3 +0.0
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.8 +0.6 +0.2 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.6 +0.7 +0.5 +0.4 +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.4 +0.8 +0.7 +0.4 -0.0
nln NLN +0.7 +0.8 +0.7 +0.4 +0.0
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 +0.7 +0.3 +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.6 +0.9 +0.7 +0.4 +0.1
nln NLN +0.8 +0.8 +0.7 +0.4 +0.0
nln NLN +0.8 +0.8 +0.7 +0.4 +0.0
nln NLN +0.7 +0.9 +0.7 +0.4 +0.0
nln NLN +0.7 +0.9 +0.7 +0.5 +0.0
nln NLN +0.8 +0.9 +0.8 +0.4 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.7 +1.9 +1.4 +1.6 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.9 +1.8 +1.5 +1.7 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.9 +1.9 +1.6 +1.8 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.9 +2.0 +1.5 +1.8 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.9 +2.0 +1.5 +1.8 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +2.2 +2.3 +1.9 +2.0 +0.0
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EX31_RS22205
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EX31_RS22210
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EX31_RS22220
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EX31_RS22225
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