Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS21850 and EX31_RS21855 overlap by 1 nucleotidesEX31_RS21855 and EX31_RS21860 are separated by 34 nucleotidesEX31_RS21860 and EX31_RS21865 are separated by 113 nucleotidesEX31_RS21865 and EX31_RS21870 are separated by 143 nucleotides EX31_RS21850: EX31_RS21850 - pyridoxine 5'-phosphate synthase, at 113,245 to 113,976 _RS21850 EX31_RS21855: EX31_RS21855 - holo-ACP synthase, at 113,976 to 114,356 _RS21855 EX31_RS21860: EX31_RS21860 - YfhL family 4Fe-4S dicluster ferredoxin, at 114,391 to 114,645 _RS21860 EX31_RS21865: EX31_RS21865 - MurR/RpiR family transcriptional regulator, at 114,759 to 115,607 _RS21865 EX31_RS21870: EX31_RS21870 - N-acetylmuramic acid 6-phosphate etherase, at 115,751 to 116,656 _RS21870
Group Condition EX31_RS21850 EX31_RS21855 EX31_RS21860 EX31_RS21865 EX31_RS21870
nitrogen source Ammonium chloride (N); RCH2 media; shaking -4.3 N.D. +0.2 -0.0 -0.4
carbon source D-Xylose (C) -3.7 N.D. -0.4 +0.1 -0.4
nitrogen source L-Glutamine (N); RCH2 media; no shaking -4.1 N.D. -0.0 -0.2 +0.1
nf_with_fulln NF_with_fullN -3.9 N.D. -0.0 -0.1 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -4.1 N.D. +0.3 -0.4 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -4.0 N.D. +0.2 +0.0 -0.3
nf_with_fulln NF_with_fullN -3.9 N.D. +0.1 -0.0 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking -3.6 N.D. -0.3 +0.0 +0.0
carbon source D-Glucose (C) -3.8 N.D. -0.0 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking -3.1 N.D. -0.3 -0.1 -0.2
nf_with_fulln NF_with_fullN -3.2 N.D. -0.0 -0.2 -0.1
nf_with_fulln NF_with_fullN -3.0 N.D. -0.2 -0.2 -0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -2.9 N.D. -0.4 -0.0 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -3.1 N.D. -0.2 +0.0 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -2.7 N.D. -0.2 -0.1 -0.3
mgl MGL -3.3 N.D. +0.1 -0.0 +0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking -3.1 N.D. -0.2 -0.0 +0.1
carbon source D-Xylose (C) -2.9 N.D. -0.2 -0.1 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -2.5 N.D. -0.5 -0.3 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -2.8 N.D. -0.5 +0.1 +0.2
nln NLN -2.9 N.D. -0.1 -0.1 +0.0
carbon source Sucrose (C) -2.9 N.D. -0.0 -0.2 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -3.2 N.D. +0.3 +0.0 -0.1
nf_with10percent_fulln NF_with10percent_fullN -3.2 N.D. +0.1 +0.1 +0.1
carbon source D-Mannitol (C) -2.6 N.D. -0.2 +0.1 -0.2
nf_with10percent_fulln NF_with10percent_fullN -3.1 N.D. +0.2 +0.1 +0.0
carbon source casaminos (C) -2.9 N.D. -0.2 +0.2 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking -2.4 N.D. -0.3 +0.1 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -2.7 N.D. +0.0 +0.2 +0.1
carbon source NLDM_metabolites (C) -2.8 N.D. +0.2 +0.1 +0.1
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