Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS21840 and EX31_RS21845 are separated by 11 nucleotidesEX31_RS21845 and EX31_RS21850 are separated by 103 nucleotidesEX31_RS21850 and EX31_RS21855 overlap by 1 nucleotidesEX31_RS21855 and EX31_RS21860 are separated by 34 nucleotides EX31_RS21840: EX31_RS21840 - GTPase Era, at 111,487 to 112,392 _RS21840 EX31_RS21845: EX31_RS21845 - DNA repair protein RecO, at 112,404 to 113,141 _RS21845 EX31_RS21850: EX31_RS21850 - pyridoxine 5'-phosphate synthase, at 113,245 to 113,976 _RS21850 EX31_RS21855: EX31_RS21855 - holo-ACP synthase, at 113,976 to 114,356 _RS21855 EX31_RS21860: EX31_RS21860 - YfhL family 4Fe-4S dicluster ferredoxin, at 114,391 to 114,645 _RS21860
Group Condition EX31_RS21840 EX31_RS21845 EX31_RS21850 EX31_RS21855 EX31_RS21860
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.3 -4.1 N.D. -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.3 -4.3 N.D. +0.2
carbon source D-Xylose (C) N.D. -0.3 -3.7 N.D. -0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.3 -3.6 N.D. -0.3
nf_with_fulln NF_with_fullN N.D. -0.2 -3.9 N.D. -0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.3 -4.0 N.D. +0.2
carbon source D-Glucose (C) N.D. -0.2 -3.8 N.D. -0.0
mgl MGL N.D. -0.5 -3.3 N.D. +0.1
nf_with_fulln NF_with_fullN N.D. -0.0 -3.9 N.D. +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. +0.0 -4.1 N.D. +0.3
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -0.3 -2.9 N.D. -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking N.D. -0.3 -3.1 N.D. -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.0 -3.1 N.D. -0.3
carbon source D-Xylose (C) N.D. -0.3 -2.9 N.D. -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking N.D. -0.1 -2.8 N.D. -0.5
nitrogen source L-Glutamine (N); RCH2 media; shaking N.D. -0.1 -3.1 N.D. -0.2
nf_with_fulln NF_with_fullN N.D. -0.0 -3.2 N.D. -0.0
nf_with10percent_fulln NF_with10percent_fullN N.D. -0.2 -3.2 N.D. +0.1
nf_with_fulln NF_with_fullN N.D. -0.1 -3.0 N.D. -0.2
carbon source casaminos (C) N.D. -0.2 -2.9 N.D. -0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking N.D. -0.4 -2.4 N.D. -0.3
carbon source Sucrose (C) N.D. -0.3 -2.9 N.D. -0.0
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.2 -2.7 N.D. -0.2
nln NLN N.D. -0.2 -2.9 N.D. -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking N.D. -0.2 -2.5 N.D. -0.5
nitrogen source Ammonium chloride (N); ShewMM media; shaking N.D. -0.3 -2.3 N.D. -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking N.D. -0.1 -3.2 N.D. +0.3
nf_with10percent_fulln NF_with10percent_fullN N.D. -0.1 -3.1 N.D. +0.2
carbon source NLDM_metabolites (C) N.D. -0.2 -2.8 N.D. +0.2
carbon source Sucrose (C) N.D. +0.2 -2.8 N.D. +0.1
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EX31_RS21840
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EX31_RS21845
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EX31_RS21860
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