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Protein
Homologs
Fitness for 5 genes in
Rahnella sp. WP5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX31_RS21815 and EX31_RS21820 are separated by 60 nucleotides
EX31_RS21820 and EX31_RS21825 are separated by 424 nucleotides
EX31_RS21825 and EX31_RS21830 are separated by 28 nucleotides
EX31_RS21830 and EX31_RS21835 are separated by 211 nucleotides
EX31_RS21815: EX31_RS21815 - SoxR-reducing system protein RseC, at 106,013 to 106,489
_RS21815
EX31_RS21820: EX31_RS21820 - hypothetical protein, at 106,550 to 107,368
_RS21820
EX31_RS21825: EX31_RS21825 - elongation factor 4, at 107,793 to 109,592
_RS21825
EX31_RS21830: EX31_RS21830 - signal peptidase I, at 109,621 to 110,598
_RS21830
EX31_RS21835: EX31_RS21835 - ribonuclease III, at 110,810 to 111,490
_RS21835
Group
Condition
EX31
_RS21815
EX31
_RS21820
EX31
_RS21825
EX31
_RS21830
EX31
_RS21835
carbon source
NLDM_metabolites (C)
-0.5
+0.5
-1.8
N.D.
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
-0.8
+0.0
-1.0
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
-0.8
-0.0
-0.8
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
-0.4
-0.0
-1.1
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; no shaking
-0.4
-0.1
-1.0
N.D.
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.3
+0.2
-1.3
N.D.
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.3
+0.0
-1.0
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
-0.5
-0.0
-0.8
N.D.
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
-0.5
-0.0
-0.7
N.D.
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; shaking
-0.4
+0.0
-0.8
N.D.
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; no shaking
-0.4
-0.0
-0.7
N.D.
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
-0.3
+0.1
-0.9
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
-0.2
-0.1
-0.7
N.D.
N.D.
nitrogen source
L-Serine (N); ShewMM media; no shaking
-0.5
+0.1
-0.7
N.D.
N.D.
carbon source
NLDM_metabolites (C)
-0.3
+0.2
-1.0
N.D.
N.D.
nitrogen source
Ammonium chloride (N); RCH2 media; shaking
-0.5
-0.0
-0.5
N.D.
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; shaking
-0.5
+0.0
-0.6
N.D.
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
-0.3
+0.1
-0.7
N.D.
N.D.
nitrogen source
L-Glutamine (N); RCH2 media; shaking
-0.4
+0.1
-0.5
N.D.
N.D.
nitrogen source
L-Serine (N); ShewMM media; shaking
-0.3
+0.1
-0.7
N.D.
N.D.
nitrogen source
L-Serine (N); RCH2 media; no shaking
-0.5
+0.2
-0.6
N.D.
N.D.
nitrogen source
L-Serine (N); RCH2 media; no shaking
-0.2
+0.1
-0.6
N.D.
N.D.
nitrogen source
L-Serine (N); RCH2 media; shaking
-0.3
+0.2
-0.7
N.D.
N.D.
nitrogen source
L-Glutamine (N); ShewMM media; no shaking
-0.3
+0.2
-0.7
N.D.
N.D.
mgl
MGL
+0.0
+0.1
-0.9
N.D.
N.D.
carbon source
Sucrose (C)
-0.3
+0.1
-0.6
N.D.
N.D.
nitrogen source
Ammonium chloride (N); ShewMM media; no shaking
-0.4
+0.1
-0.5
N.D.
N.D.
nitrogen source
L-Serine (N); RCH2 media; shaking
-0.2
+0.2
-0.7
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.4
+0.0
-0.6
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.2
-0.5
N.D.
N.D.
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