Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS21695 and EX31_RS21700 are separated by 278 nucleotidesEX31_RS21700 and EX31_RS21705 are separated by 190 nucleotidesEX31_RS21705 and EX31_RS21715 are separated by 353 nucleotidesEX31_RS21715 and EX31_RS25615 are separated by 275 nucleotides EX31_RS21695: EX31_RS21695 - tagatose-bisphosphate aldolase subunit GatZ, at 82,662 to 83,957 _RS21695 EX31_RS21700: EX31_RS21700 - DeoR/GlpR transcriptional regulator, at 84,236 to 85,018 _RS21700 EX31_RS21705: EX31_RS21705 - ABC transporter substrate-binding protein, at 85,209 to 85,988 _RS21705 EX31_RS21715: EX31_RS21715 - glycoside hydrolase, at 86,342 to 89,224 _RS21715 EX31_RS25615: EX31_RS25615 - AlpA family phage regulatory protein, at 89,500 to 89,638 _RS25615
Group Condition EX31_RS21695 EX31_RS21700 EX31_RS21705 EX31_RS21715 EX31_RS25615
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.1 -0.4 -0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking -0.2 -0.7 -0.0 +0.0 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.5 -0.2 +0.0 N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.4 -0.1 -0.2 -0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 -0.2 -0.2 -0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.0 -0.3 -0.4 -0.0 N.D.
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.3 -0.4 -0.1 +0.0 N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.2 -0.3 +0.0 N.D.
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.3 -0.2 -0.1 +0.0 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.3 -0.3 +0.0 N.D.
carbon source casaminos (C) -0.1 -0.5 +0.2 -0.0 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.4 -0.2 +0.0 +0.0 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.4 +0.1 -0.1 N.D.
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 -0.5 +0.1 +0.0 N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.1 +0.2 -0.2 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 -0.2 +0.2 -0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 -0.4 -0.2 +0.3 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 -0.3 +0.2 +0.1 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.3 +0.3 -0.0 N.D.
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.0 -0.4 +0.2 +0.1 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 -0.1 +0.2 +0.1 N.D.
mgl MGL -0.0 -0.4 +0.3 +0.1 N.D.
carbon source D-Xylose (C) +0.2 -0.3 +0.1 +0.0 N.D.
carbon source casaminos (C) +0.2 -0.5 +0.4 +0.0 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.2 +0.4 +0.1 N.D.
carbon source NLDM_metabolites (C) +0.3 -0.1 +0.2 -0.0 N.D.
carbon source NLDM_metabolites (C) -0.1 +0.5 +0.1 +0.1 N.D.
carbon source Sucrose (C) +0.1 +0.0 +0.5 +0.0 N.D.
carbon source D-Glucose (C) +0.2 +0.2 +0.4 +0.1 N.D.
carbon source D-Mannitol (C) +0.3 +0.2 +0.6 +0.0 N.D.
remove
EX31_RS21695
plot		 remove
EX31_RS21700
plot		 remove
EX31_RS21705		 remove
EX31_RS21715
plot		 remove
EX31_RS25615
plot