Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS21345 and EX31_RS21350 are separated by 515 nucleotidesEX31_RS21350 and EX31_RS21355 are separated by 880 nucleotidesEX31_RS21355 and EX31_RS21360 are separated by 71 nucleotidesEX31_RS21360 and EX31_RS21365 overlap by 8 nucleotides EX31_RS21345: EX31_RS21345 - fimbria/pilus periplasmic chaperone, at 4,489 to 5,232 _RS21345 EX31_RS21350: EX31_RS21350 - methionine adenosyltransferase, at 5,748 to 6,899 _RS21350 EX31_RS21355: EX31_RS21355 - biosynthetic arginine decarboxylase, at 7,780 to 9,762 _RS21355 EX31_RS21360: EX31_RS21360 - fimbrial protein, at 9,834 to 10,958 _RS21360 EX31_RS21365: EX31_RS21365 - fimbrial protein, at 10,951 to 11,553 _RS21365
Group Condition EX31_RS21345 EX31_RS21350 EX31_RS21355 EX31_RS21360 EX31_RS21365
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.8 N.D. -0.1 +0.1 -0.1
carbon source NLDM_metabolites (C) -1.0 N.D. +0.1 +0.2 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.8 N.D. +0.0 +0.1 -0.3
nitrogen source L-Serine (N); ShewMM media; no shaking -0.7 N.D. -0.0 -0.0 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 N.D. -0.1 -0.0 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.6 N.D. +0.0 +0.1 -0.3
nitrogen source L-Serine (N); ShewMM media; shaking -0.7 N.D. -0.0 +0.0 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.5 N.D. -0.1 +0.0 -0.2
nitrogen source L-Serine (N); ShewMM media; shaking -0.4 N.D. -0.2 -0.1 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.7 N.D. -0.0 +0.1 -0.0
nitrogen source L-Serine (N); ShewMM media; no shaking -0.6 N.D. -0.1 +0.1 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.6 N.D. -0.0 +0.0 +0.0
carbon source casaminos (C) -0.4 N.D. +0.0 +0.0 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.5 N.D. +0.0 +0.1 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 N.D. -0.1 +0.1 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.4 N.D. -0.1 +0.1 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 N.D. -0.2 +0.1 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.4 N.D. -0.1 +0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.4 N.D. -0.1 -0.0 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.5 N.D. -0.0 -0.1 +0.3
carbon source casaminos (C) +0.1 N.D. -0.1 +0.2 -0.4
nl-ccm; vial NL-CCM; vial +0.3 N.D. -0.2 +0.0 -0.2
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 N.D. -0.1 +0.0 +0.4
mgl MGL -0.2 N.D. +0.1 +0.0 +0.4
carbon source Sucrose (C) +0.5 N.D. -0.0 +0.2 -0.1
mgl MGL +0.3 N.D. -0.0 +0.1 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.4 N.D. -0.1 +0.0 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 N.D. +0.0 +0.1 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.4 N.D. -0.2 +0.0 +0.5
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.5 N.D. -0.1 +0.1 +0.3
remove
EX31_RS21345
plot		 remove
EX31_RS21350
plot		 remove
EX31_RS21355		 remove
EX31_RS21360
plot		 remove
EX31_RS21365
plot