Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS21295 and EX31_RS21300 are separated by 10 nucleotidesEX31_RS21300 and EX31_RS21305 are separated by 3 nucleotidesEX31_RS21305 and EX31_RS21310 overlap by 1 nucleotidesEX31_RS21310 and EX31_RS21315 are separated by 430 nucleotides EX31_RS21295: EX31_RS21295 - acyl carrier protein, at 901,086 to 901,340 _RS21295 EX31_RS21300: EX31_RS21300 - acyl carrier protein, at 901,351 to 901,608 _RS21300 EX31_RS21305: EX31_RS21305 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 901,612 to 902,424 _RS21305 EX31_RS21310: EX31_RS21310 - beta-ketoacyl synthase chain length factor, at 902,424 to 903,149 _RS21310 EX31_RS21315: EX31_RS21315 - tRNA-Asp, at 903,580 to 903,656 _RS21315
Group Condition EX31_RS21295 EX31_RS21300 EX31_RS21305 EX31_RS21310 EX31_RS21315
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.9 -0.3 -0.2 -0.1 N.D.
carbon source D,L-Lactate (C) -0.1 -1.6 +0.2 +0.1 N.D.
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.2 -1.2 -0.1 +0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; no shaking -0.6 -0.4 -0.2 -0.1 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -1.4 -0.2 +0.2 N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.6 -0.8 +0.2 -0.0 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.9 -0.1 -0.1 N.D.
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 -1.0 -0.0 -0.1 N.D.
nf_with_fulln NF_with_fullN -0.6 -0.5 -0.0 +0.0 N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.5 -0.4 +0.1 -0.1 N.D.
nl-ccm_agar NL-CCM_agar -0.4 -0.6 -0.0 +0.1 N.D.
nf_with_fulln NF_with_fullN -0.8 -0.3 +0.1 +0.1 N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -1.0 +0.1 +0.1 +0.0 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.8 -1.5 +0.0 -0.1 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.9 +0.2 -0.1 N.D.
nitrogen source L-Serine (N); RCH2 media; shaking -0.5 +0.2 -0.5 +0.1 N.D.
carbon source D-Mannitol (C) -0.6 -0.3 +0.1 +0.1 N.D.
carbon source casaminos (C) -0.6 -0.4 +0.3 +0.0 N.D.
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.4 -0.9 +0.0 +0.0 N.D.
carbon source Sucrose (C) +0.5 -0.8 -0.0 -0.1 N.D.
carbon source NLDM_metabolites (C) -1.7 +1.2 +0.4 -0.2 N.D.
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.5 -0.8 -0.0 +0.1 N.D.
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.2 +0.4 +0.0 -0.4 N.D.
nln NLN -0.5 +0.5 +0.0 -0.1 N.D.
carbon source D-Xylose (C) +0.5 -0.5 +0.3 -0.2 N.D.
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.5 +0.4 +0.1 -0.1 N.D.
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.4 +0.5 +0.2 -0.1 N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 +0.4 +0.3 +0.3 N.D.
nl-ccm_agar NL-CCM_agar +0.3 +0.8 +0.2 -0.0 N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +1.0 +0.2 +0.0 N.D.
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EX31_RS21295
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EX31_RS21300
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EX31_RS21315
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