Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS20395 and EX31_RS20400 are separated by 423 nucleotidesEX31_RS20400 and EX31_RS20405 are separated by 36 nucleotidesEX31_RS20405 and EX31_RS20410 overlap by 16 nucleotidesEX31_RS20410 and EX31_RS20415 overlap by 17 nucleotides EX31_RS20395: EX31_RS20395 - hydroxyethylthiazole kinase, at 711,575 to 712,384 _RS20395 EX31_RS20400: EX31_RS20400 - glycosyltransferase family 2 protein, at 712,808 to 713,797 _RS20400 EX31_RS20405: EX31_RS20405 - class I SAM-dependent methyltransferase, at 713,834 to 714,466 _RS20405 EX31_RS20410: EX31_RS20410 - hypothetical protein, at 714,451 to 715,359 _RS20410 EX31_RS20415: EX31_RS20415 - phospholipid carrier-dependent glycosyltransferase, at 715,343 to 717,115 _RS20415
Group Condition EX31_RS20395 EX31_RS20400 EX31_RS20405 EX31_RS20410 EX31_RS20415
nf_with10percent_fulln NF_with10percent_fullN +0.1 -0.2 -0.6 -0.6 -0.8
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 -0.2 -0.6 -0.9 -0.6
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.2 -0.5 -0.6 -0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.4 -0.2 -0.7 -0.5
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.3 -1.0 -0.1 -0.3
nf_with10percent_fulln NF_with10percent_fullN +0.4 -0.2 -0.9 -0.7 -0.6
nf_with10percent_fulln NF_with10percent_fullN +0.1 -0.2 -0.5 -0.8 -0.5
nf_with10percent_fulln NF_with10percent_fullN +0.2 -0.2 -0.9 -0.4 -0.5
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 -0.3 -0.6 -0.6 -0.5
nln NLN -0.4 -0.1 -0.5 -0.4 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.0 -0.2 -0.3 -0.6 -0.4
nf_with10percent_fulln NF_with10percent_fullN +0.0 -0.3 -0.5 -0.3 -0.5
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 -0.1 -0.6 -0.9 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 -0.3 -0.6 -0.6 -0.4
carbon source NLDM_metabolites (C) -0.1 +0.2 -0.1 -1.5 +0.0
nl-ccm; low oxygen NL-CCM; low oxygen -0.2 +0.0 -0.7 -0.3 -0.2
nl-ccm; low oxygen NL-CCM; low oxygen +0.0 -0.2 -0.6 -0.3 -0.3
nl-ccm; low oxygen NL-CCM; low oxygen +0.2 -0.2 -0.3 -0.7 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.2 -0.7 -0.5 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.4 -0.2 -0.7 -0.3 -0.4
nl-ccm; low oxygen NL-CCM; low oxygen +0.5 -0.2 -0.4 -0.7 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen +0.7 -0.1 -0.6 -0.4 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking -0.8 -0.1 +0.5 -0.1 -0.3
carbon source Sucrose (C) -0.0 +0.1 +0.4 -0.5 -0.6
carbon source NLDM_metabolites (C) +0.0 +0.4 +0.3 -0.7 -0.5
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 +0.1 +0.6 +0.2 -0.5
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.4 -0.1 -0.5 +0.7 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 +0.2 +0.6 +0.2 -0.1
carbon source D-Xylose (C) +0.4 +0.1 +0.5 +0.3 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 +0.1 +0.5 +0.8 +0.3
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EX31_RS20395
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EX31_RS20400
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EX31_RS20410
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EX31_RS20415
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