Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS20135 and EX31_RS20140 are separated by 114 nucleotidesEX31_RS20140 and EX31_RS20145 are separated by 32 nucleotidesEX31_RS20145 and EX31_RS20150 are separated by 98 nucleotidesEX31_RS20150 and EX31_RS20155 are separated by 78 nucleotides EX31_RS20135: EX31_RS20135 - nucleotidyltransferase family protein, at 655,732 to 656,283 _RS20135 EX31_RS20140: EX31_RS20140 - hypothetical protein, at 656,398 to 656,739 _RS20140 EX31_RS20145: EX31_RS20145 - LysR family transcriptional regulator, at 656,772 to 657,698 _RS20145 EX31_RS20150: EX31_RS20150 - bile acid:sodium symporter, at 657,797 to 658,786 _RS20150 EX31_RS20155: EX31_RS20155 - DUF3820 family protein, at 658,865 to 659,107 _RS20155
Group Condition EX31_RS20135 EX31_RS20140 EX31_RS20145 EX31_RS20150 EX31_RS20155
carbon source D-Mannitol (C) -0.1 -1.0 -0.0 -0.0 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.4 -0.6 +0.1 +0.1 -0.2
carbon source NLDM_metabolites (C) +0.3 -1.1 +0.1 +0.1 -0.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.7 +0.5 +0.3 -0.1 -0.8
nitrogen source L-Serine (N); RCH2 media; shaking +0.3 -1.5 +0.4 +0.0 -0.1
nl-ccm; low oxygen NL-CCM; low oxygen -0.6 -0.3 +0.2 +0.0 -0.1
nf_with_fulln NF_with_fullN -0.7 -0.2 +0.2 +0.0 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -0.6 +0.2 +0.0 +0.0
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 -0.6 +0.2 +0.1 -0.0
nf_with10percent_fulln NF_with10percent_fullN -0.6 +0.5 +0.1 -0.1 -0.1
nln NLN -0.8 +0.4 +0.3 -0.0 -0.1
mgl MGL -0.1 -0.6 +0.3 +0.2 -0.1
nf_with_fulln NF_with_fullN -0.4 +0.3 +0.2 +0.0 -0.2
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.4 -0.3 +0.1 +0.1 -0.3
carbon source D-Mannitol (C) +0.3 +0.2 +0.1 -0.1 -0.5
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.2 -0.4 +0.3 +0.0 -0.1
nf_with_fulln NF_with_fullN -0.6 +0.4 +0.2 +0.1 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.4 -0.0 +0.4 +0.1 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.7 +0.7 +0.4 -0.0 -0.1
nf_with_fulln NF_with_fullN -0.2 +0.5 +0.2 +0.1 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.5 +0.1 -0.0 -0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.4 +0.2 +0.3 +0.2 +0.2
carbon source Sucrose (C) +0.1 +0.5 +0.1 -0.2 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking +0.3 +0.6 -0.2 +0.4 -0.2
carbon source NLDM_metabolites (C) +0.1 +1.1 -0.0 -0.3 +0.2
nf_with_fulln NF_with_fullN -0.2 +0.8 +0.4 +0.0 -0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.3 +0.7 +0.4 +0.2 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 +0.4 +0.1 +0.2 +0.4
nitrogen source L-Serine (N); ShewMM media; shaking +0.3 +0.4 +0.3 +0.0 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.3 +0.6 +0.1 +0.2 +0.2
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EX31_RS20155
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