Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS19675 and EX31_RS19680 are separated by 45 nucleotidesEX31_RS19680 and EX31_RS19685 are separated by 8 nucleotidesEX31_RS19685 and EX31_RS19690 are separated by 82 nucleotidesEX31_RS19690 and EX31_RS19695 are separated by 203 nucleotides EX31_RS19675: EX31_RS19675 - TSUP family transporter, at 567,642 to 568,442 _RS19675 EX31_RS19680: EX31_RS19680 - penicillin-insensitive murein endopeptidase, at 568,488 to 569,339 _RS19680 EX31_RS19685: EX31_RS19685 - chorismate synthase, at 569,348 to 570,433 _RS19685 EX31_RS19690: EX31_RS19690 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 570,516 to 571,448 _RS19690 EX31_RS19695: EX31_RS19695 - endonuclease SmrB, at 571,652 to 572,191 _RS19695
Group Condition EX31_RS19675 EX31_RS19680 EX31_RS19685 EX31_RS19690 EX31_RS19695
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.0 N.D. -1.3 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.1 N.D. -0.9 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.2 N.D. -1.0 -0.4
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.2 +0.1 N.D. -1.1 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 -0.1 N.D. -0.7 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.0 -0.1 N.D. -0.8 -0.0
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.4 -0.0 N.D. -0.4 -0.2
carbon source D-Mannitol (C) +0.1 +0.2 N.D. -0.9 -0.4
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.3 +0.0 N.D. -0.7 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.2 +0.0 N.D. -0.7 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 +0.2 N.D. -0.6 -0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.0 +0.4 N.D. -1.3 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 +0.2 N.D. -0.8 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.2 +0.2 N.D. -0.9 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.3 N.D. -0.5 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.0 N.D. -0.5 +0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 -0.0 N.D. -0.6 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.1 +0.3 N.D. -0.5 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.3 +0.4 N.D. -0.6 +0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 +0.0 N.D. -0.5 +0.3
carbon source Sucrose (C) -0.1 +0.3 N.D. -0.5 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 +0.4 N.D. -0.3 -0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.6 N.D. -0.4 -0.2
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 +0.2 N.D. -0.4 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 +0.3 N.D. -0.3 +0.2
carbon source casaminos (C) -0.2 +0.3 N.D. +0.3 -0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.0 +0.3 N.D. -0.3 +0.4
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 +0.3 N.D. -0.3 +0.2
carbon source NLDM_metabolites (C) -0.1 +0.3 N.D. +0.3 -0.0
carbon source NLDM_metabolites (C) +0.3 +0.6 N.D. -0.3 +0.4
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