Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS19190 and EX31_RS19195 are separated by 27 nucleotidesEX31_RS19195 and EX31_RS19200 are separated by 332 nucleotidesEX31_RS19200 and EX31_RS19205 are separated by 160 nucleotidesEX31_RS19205 and EX31_RS19210 are separated by 216 nucleotides EX31_RS19190: EX31_RS19190 - Bcr/CflA family multidrug efflux MFS transporter, at 433,846 to 435,051 _RS19190 EX31_RS19195: EX31_RS19195 - 16S rRNA pseudouridine(516) synthase RsuA, at 435,079 to 435,786 _RS19195 EX31_RS19200: EX31_RS19200 - DEAD/DEAH box helicase, at 436,119 to 437,882 _RS19200 EX31_RS19205: EX31_RS19205 - 50S ribosomal protein L25, at 438,043 to 438,333 _RS19205 EX31_RS19210: EX31_RS19210 - nucleoid-associated protein YejK, at 438,550 to 439,554 _RS19210
Group Condition EX31_RS19190 EX31_RS19195 EX31_RS19200 EX31_RS19205 EX31_RS19210
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.3 -0.1 -2.5 -0.1
carbon source NLDM_metabolites (C) -0.1 +0.2 -0.2 -2.8 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.1 -0.0 -2.1 -0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.5 +0.2 -2.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.2 -0.0 -1.8 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.5 -0.0 -1.2 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -0.0 -0.1 -2.1 +0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 +0.0 -0.0 -1.7 -0.2
carbon source Sucrose (C) +0.3 -0.6 -0.1 -1.4 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 -0.1 -0.0 -1.5 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.1 +0.0 -1.6 -0.0
nf_with_fulln NF_with_fullN -0.0 -0.5 -0.1 -0.7 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 -0.2 -0.1 -1.3 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.1 +0.0 -1.7 +0.0
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 -0.0 -0.1 -1.5 +0.2
carbon source D-Mannitol (C) +0.1 -0.3 +0.1 -1.2 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 -0.1 +0.1 -1.5 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.2 +0.1 -1.4 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 +0.3 -0.0 -1.5 +0.1
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 +0.2 +0.0 -1.2 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 +0.2 +0.0 -1.2 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.2 -0.0 -1.4 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 +0.5 +0.0 -1.6 +0.1
carbon source Sucrose (C) -0.1 +0.3 +0.1 -1.0 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.1 -0.0 +1.5 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.2 -0.1 +1.7 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.4 -0.1 +2.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.4 +0.0 +1.9 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.3 -0.1 +1.9 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.2 -0.0 +2.4 +0.0
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