Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS19120 and EX31_RS19125 are separated by 66 nucleotidesEX31_RS19125 and EX31_RS19130 are separated by 194 nucleotidesEX31_RS19130 and EX31_RS19135 are separated by 10 nucleotidesEX31_RS19135 and EX31_RS19140 overlap by 1 nucleotides EX31_RS19120: EX31_RS19120 - bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase, at 416,673 to 417,248 _RS19120 EX31_RS19125: EX31_RS19125 - cyclic di-GMP phosphodiesterase, at 417,315 to 418,997 _RS19125 EX31_RS19130: EX31_RS19130 - ABC transporter substrate-binding protein, at 419,192 to 420,997 _RS19130 EX31_RS19135: EX31_RS19135 - microcin C ABC transporter permease YejB, at 421,008 to 422,102 _RS19135 EX31_RS19140: EX31_RS19140 - ABC transporter permease subunit, at 422,102 to 423,145 _RS19140
Group Condition EX31_RS19120 EX31_RS19125 EX31_RS19130 EX31_RS19135 EX31_RS19140
nl-ccm; high oxygen NL-CCM; high oxygen +0.7 -0.2 -0.4 -0.2 -0.1
carbon source D,L-Lactate (C) -0.4 +0.3 -0.1 +0.2 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.6 +0.0 -0.2 -0.4 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.9 +0.0 -0.3 -0.4 -0.2
nl-ccm; low oxygen NL-CCM; low oxygen +0.5 -0.0 -0.2 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.8 -0.0 -0.2 -0.3 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.6 -0.0 -0.2 -0.2 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 -0.0 +0.1 -0.4 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.5 -0.2 -0.1 -0.0 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.5 -0.0 -0.1 +0.0 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.7 -0.1 -0.1 -0.3 -0.1
nf_with_fulln NF_with_fullN +0.7 -0.0 -0.1 -0.2 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.9 -0.0 -0.2 -0.2 -0.1
nf_with_fulln NF_with_fullN +0.8 +0.1 -0.1 -0.2 -0.1
nf_with_fulln NF_with_fullN +0.8 +0.1 -0.1 -0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.9 -0.0 -0.1 -0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.8 -0.1 -0.0 -0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.0 -0.0 -0.2 -0.1 -0.1
nf_with_fulln NF_with_fullN +0.8 +0.1 -0.1 -0.1 -0.1
nl-ccm; low oxygen NL-CCM; low oxygen +0.5 -0.0 -0.1 +0.1 +0.2
nf_with10percent_fulln NF_with10percent_fullN +0.8 -0.1 -0.1 +0.0 +0.1
nf_with_fulln NF_with_fullN +0.8 +0.0 -0.0 -0.0 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.8 +0.0 -0.1 -0.1 +0.1
nf_with_fulln NF_with_fullN +0.7 +0.3 +0.1 -0.1 -0.2
nf_with10percent_fulln NF_with10percent_fullN +0.9 -0.1 -0.1 +0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +1.0 -0.1 -0.1 -0.1 +0.1
carbon source D-Xylose (C) +0.5 +0.0 +0.2 -0.0 +0.2
carbon source Sucrose (C) +0.4 +0.1 +0.2 +0.3 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.9 +0.0 -0.1 -0.0 +0.1
carbon source D-Xylose (C) +0.6 +0.0 +0.3 +0.2 +0.1
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EX31_RS19120
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EX31_RS19125
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EX31_RS19135
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EX31_RS19140
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