Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS18910 and EX31_RS18915 are separated by 414 nucleotidesEX31_RS18915 and EX31_RS18920 are separated by 622 nucleotidesEX31_RS18920 and EX31_RS18925 overlap by 4 nucleotidesEX31_RS18925 and EX31_RS18930 are separated by 30 nucleotides EX31_RS18910: EX31_RS18910 - hypothetical protein, at 367,570 to 368,247 _RS18910 EX31_RS18915: EX31_RS18915 - DNA starvation/stationary phase protection protein Dps, at 368,662 to 369,165 _RS18915 EX31_RS18920: EX31_RS18920 - ABC transporter permease, at 369,788 to 370,564 _RS18920 EX31_RS18925: EX31_RS18925 - ABC transporter ATP-binding protein, at 370,561 to 371,226 _RS18925 EX31_RS18930: EX31_RS18930 - capsular biosynthesis protein, at 371,257 to 372,249 _RS18930
Group Condition EX31_RS18910 EX31_RS18915 EX31_RS18920 EX31_RS18925 EX31_RS18930
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.1 -0.8 -0.4 -0.4
mgl MGL +0.2 -0.2 -0.3 -0.4 -0.4
nitrogen source L-Serine (N); ShewMM media; shaking +0.3 -0.3 -0.4 +0.1 -0.6
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.1 -0.2 -0.5 -0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.4 -0.4 -0.2 +0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.2 -0.0 -0.3 -0.5
carbon source Sucrose (C) +0.0 +0.1 -0.4 -0.5 +0.3
nf_with10percent_fulln NF_with10percent_fullN +0.3 +0.0 -0.1 -0.5 -0.2
carbon source D-Glucose (C) +0.0 +0.1 -0.7 +0.1 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.4 -0.1 -0.4 -0.1 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 -0.0 -0.6 +0.2 -0.2
nf_with_fulln NF_with_fullN -0.0 -0.0 +0.3 -0.6 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 -0.3 -0.3 -0.0 +0.4
nf_with_fulln NF_with_fullN +0.1 +0.2 -0.1 -0.7 +0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.1 +0.2 -0.3 +0.3 -0.2
nitrogen source L-Serine (N); ShewMM media; no shaking +0.3 +0.2 -0.4 -0.3 +0.2
nl-ccm; high oxygen NL-CCM; high oxygen +0.4 +0.2 +0.1 -0.4 -0.2
mgl MGL +0.3 -0.1 -0.1 -0.3 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.3 -0.2 -0.3 -0.1 +0.3
nitrogen source L-Serine (N); RCH2 media; no shaking +0.4 +0.3 -0.3 +0.1 -0.4
nln NLN +0.1 +0.2 +0.0 -0.6 +0.4
carbon source casaminos (C) +0.0 -0.0 -0.5 +0.4 +0.5
carbon source NLDM_metabolites (C) +0.2 +0.4 -0.4 +0.3 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.5 +0.1 +0.2 -0.0 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.5 -0.2 +0.2 -0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.2 +0.1 +0.3 +0.5
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 -0.3 +0.3 +0.2 +0.4
nitrogen source L-Serine (N); RCH2 media; no shaking +0.3 +0.1 +0.3 -0.2 +0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.2 +0.6 +0.1 +0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.2 +0.0 +0.1 -0.0 +0.8
remove
EX31_RS18910
plot		 remove
EX31_RS18915
plot		 remove
EX31_RS18920		 remove
EX31_RS18925
plot		 remove
EX31_RS18930
plot