Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS18495 and EX31_RS18500 are separated by 11 nucleotidesEX31_RS18500 and EX31_RS18505 are separated by 90 nucleotidesEX31_RS18505 and EX31_RS18510 are separated by 198 nucleotidesEX31_RS18510 and EX31_RS18515 are separated by 106 nucleotides EX31_RS18495: EX31_RS18495 - dimethylsulfoxide reductase subunit B, at 268,241 to 268,858 _RS18495 EX31_RS18500: EX31_RS18500 - dimethylsulfoxide reductase subunit A, at 268,870 to 271,317 _RS18500 EX31_RS18505: EX31_RS18505 - molybdopterin-dependent oxidoreductase, at 271,408 to 273,377 _RS18505 EX31_RS18510: EX31_RS18510 - serine--tRNA ligase, at 273,576 to 274,868 _RS18510 EX31_RS18515: EX31_RS18515 - replication-associated recombination protein A, at 274,975 to 276,318 _RS18515
Group Condition EX31_RS18495 EX31_RS18500 EX31_RS18505 EX31_RS18510 EX31_RS18515
nitrogen source L-Serine (N); ShewMM media; no shaking -0.3 -0.3 -0.2 N.D. -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.3 -0.1 -0.2 N.D. +0.0
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.1 -0.2 N.D. -0.0
nf_with10percent_fulln NF_with10percent_fullN +0.0 -0.2 -0.3 N.D. -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.1 -0.2 N.D. +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.5 -0.1 +0.1 N.D. -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.1 -0.2 N.D. +0.0
nln NLN -0.3 -0.1 -0.2 N.D. +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.3 -0.0 N.D. -0.2
nl-ccm; low oxygen NL-CCM; low oxygen -0.4 +0.0 -0.2 N.D. +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 -0.1 -0.2 N.D. +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.2 -0.2 -0.0 N.D. -0.2
mgl MGL -0.1 +0.2 -0.1 N.D. -0.2
carbon source Sucrose (C) -0.3 +0.0 -0.1 N.D. +0.2
carbon source D-Xylose (C) +0.2 -0.0 +0.1 N.D. -0.3
carbon source casaminos (C) +0.3 -0.1 -0.2 N.D. -0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.2 -0.1 +0.1 N.D. -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 +0.1 -0.1 N.D. -0.2
nl-ccm_agar NL-CCM_agar -0.1 +0.1 -0.1 N.D. +0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.4 -0.1 -0.0 N.D. -0.1
mgl MGL +0.2 +0.2 -0.1 N.D. -0.1
carbon source Sucrose (C) +0.4 -0.2 +0.1 N.D. +0.0
carbon source D-Mannitol (C) +0.3 -0.2 -0.0 N.D. +0.2
carbon source D,L-Lactate (C) +0.4 -0.1 +0.1 N.D. -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.4 -0.1 +0.0 N.D. +0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.5 -0.2 -0.0 N.D. +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.2 +0.2 +0.1 N.D. -0.1
carbon source D-Mannitol (C) +0.3 +0.0 -0.0 N.D. +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.3 +0.2 +0.1 N.D. +0.2
carbon source NLDM_metabolites (C) +0.5 +0.0 +0.1 N.D. +0.3
remove
EX31_RS18495
plot		 remove
EX31_RS18500
plot		 remove
EX31_RS18505		 remove
EX31_RS18510
plot		 remove
EX31_RS18515
plot