Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS18030 and EX31_RS18035 are separated by 216 nucleotidesEX31_RS18035 and EX31_RS18040 are separated by 357 nucleotidesEX31_RS18040 and EX31_RS18045 are separated by 109 nucleotidesEX31_RS18045 and EX31_RS18050 are separated by 210 nucleotides EX31_RS18030: EX31_RS18030 - TfoX/Sxy family DNA transformation protein, at 164,526 to 165,158 _RS18030 EX31_RS18035: EX31_RS18035 - cell division inhibitor SulA, at 165,375 to 165,881 _RS18035 EX31_RS18040: EX31_RS18040 - porin OmpA, at 166,239 to 167,315 _RS18040 EX31_RS18045: EX31_RS18045 - macrodomain Ter protein MatP, at 167,425 to 167,886 _RS18045 EX31_RS18050: EX31_RS18050 - Lon protease family protein, at 168,097 to 169,863 _RS18050
Group Condition EX31_RS18030 EX31_RS18035 EX31_RS18040 EX31_RS18045 EX31_RS18050
nf_with_fulln NF_with_fullN +0.1 -0.0 -3.4 -0.4 -0.2
nf_with_fulln NF_with_fullN -0.0 +0.1 -3.3 -0.5 -0.1
nf_with_fulln NF_with_fullN +0.3 +0.0 -3.2 -0.3 -0.2
nf_with_fulln NF_with_fullN +0.0 +0.2 -2.9 -0.4 -0.2
nf_with_fulln NF_with_fullN +0.1 +0.1 -3.1 -0.2 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.1 -0.0 -0.7 -2.0 -0.1
mgl MGL +0.1 -0.0 -2.7 -0.2 -0.2
nf_with_fulln NF_with_fullN +0.0 +0.2 -3.1 +0.2 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.4 -1.7 -0.1 -0.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.1 -1.5 -0.6 -0.2
mgl MGL -0.1 -0.2 -0.7 -1.2 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.1 -1.2 -0.6 -0.4
nl-ccm; low oxygen NL-CCM; low oxygen -0.2 +0.1 -1.2 -0.6 +0.0
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 +0.2 -0.8 -0.9 -0.4
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.1 -1.0 -1.0 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.2 +0.0 -0.8 -0.3 -0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.0 +0.2 -0.8 -0.5 -0.5
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.1 -0.0 -1.0 -0.4 -0.2
carbon source D-Glucose (C) -0.1 +0.1 +0.3 -1.4 -0.3
nf_with10percent_fulln NF_with10percent_fullN +0.1 +0.2 -1.1 -0.8 +0.1
nl-ccm; low oxygen NL-CCM; low oxygen -0.1 -0.2 -1.1 +0.2 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.3 -0.0 -0.9 +0.3 -0.4
nl-ccm NL-CCM +0.1 +0.0 -0.7 -0.8 +0.3
mgl MGL -0.1 -0.1 -1.1 +0.3 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.3 +0.1 -1.2 -0.1 +0.0
nf_with10percent_fulln NF_with10percent_fullN +0.0 +0.1 -1.2 +0.3 +0.2
carbon source D,L-Lactate (C) +0.3 +0.2 -0.4 -0.6 +0.2
nl-ccm NL-CCM -0.1 -0.0 -0.7 +0.5 +0.2
carbon source D-Xylose (C) +0.2 +0.1 +0.9 -0.2 +0.2
carbon source NLDM_metabolites (C) -0.2 -0.0 +1.6 +1.0 -0.2
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EX31_RS18030
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EX31_RS18035
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EX31_RS18045
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EX31_RS18050
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