Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS17580 and EX31_RS17585 overlap by 4 nucleotidesEX31_RS17585 and EX31_RS17590 are separated by 137 nucleotidesEX31_RS17590 and EX31_RS17595 are separated by 337 nucleotidesEX31_RS17595 and EX31_RS17600 are separated by 4 nucleotides EX31_RS17580: EX31_RS17580 - ABC transporter ATP-binding protein, at 70,350 to 71,045 _RS17580 EX31_RS17585: EX31_RS17585 - glutathione peroxidase, at 71,042 to 71,524 _RS17585 EX31_RS17590: EX31_RS17590 - thymidylate kinase, at 71,662 to 72,279 _RS17590 EX31_RS17595: EX31_RS17595 - chorismate mutase, at 72,617 to 72,913 _RS17595 EX31_RS17600: EX31_RS17600 - LysE family translocator, at 72,918 to 73,457 _RS17600
Group Condition EX31_RS17580 EX31_RS17585 EX31_RS17590 EX31_RS17595 EX31_RS17600
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.6 -0.4 -0.2 -0.3 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.7 -0.4 -0.5 +0.1
mgl MGL -0.2 -0.2 +0.2 -0.9 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.5 -0.5 -0.0 +0.2 -0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.3 -0.7 +0.1 -0.8 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.4 -0.5 -0.1 -0.7 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 -0.3 +0.1 -0.6 +0.1
nf_with_fulln NF_with_fullN -0.3 +0.3 -0.0 -0.2 -0.3
nitrogen source L-Serine (N); RCH2 media; no shaking +0.7 -0.3 +0.1 -1.3 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.4 +0.0 -0.4 +0.1
nitrogen source L-Serine (N); ShewMM media; shaking +0.4 -0.6 +0.3 -0.5 +0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 -0.2 -0.3 -0.1 +0.4
nf_with10percent_fulln NF_with10percent_fullN -0.5 +0.2 +0.2 -0.1 -0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.2 -0.3 +0.1 -0.6 +0.4
nitrogen source L-Serine (N); ShewMM media; no shaking -0.1 +0.4 -0.0 -0.6 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -0.2 -0.1 -0.6 +0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.8 +0.1 +0.0 +0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 -0.6 -0.1 -0.2 +0.3
carbon source NLDM_metabolites (C) +0.5 +0.4 -0.0 +0.0 -1.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.7 -0.2 +0.2 +0.3
mgl MGL +0.1 +0.3 -0.0 -0.6 +0.1
nln NLN -0.2 -0.2 +0.1 +0.5 -0.4
nitrogen source L-Serine (N); RCH2 media; shaking +0.3 -0.6 +0.2 -0.0 +0.1
nl-ccm; vial NL-CCM; vial -0.4 +0.3 -0.1 +0.4 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.3 -0.5 +0.1 +0.2 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.2 -0.1 +0.6 +0.2
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 +0.4 +0.1 -0.2 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.2 +0.1 +0.5 +0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.3 +0.4 -0.0 +0.5 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.2 +0.3 +0.1 +0.7 -0.1
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EX31_RS17600
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