Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS17440 and EX31_RS17445 are separated by 9 nucleotidesEX31_RS17445 and EX31_RS17450 are separated by 367 nucleotidesEX31_RS17450 and EX31_RS17455 are separated by 286 nucleotidesEX31_RS17455 and EX31_RS17460 overlap by 8 nucleotides EX31_RS17440: EX31_RS17440 - SIS domain-containing protein, at 39,773 to 40,381 _RS17440 EX31_RS17445: EX31_RS17445 - PLP-dependent aminotransferase family protein, at 40,391 to 41,824 _RS17445 EX31_RS17450: EX31_RS17450 - ATP-independent periplasmic protein-refolding chaperone, at 42,192 to 42,701 _RS17450 EX31_RS17455: EX31_RS17455 - carbon starvation protein A, at 42,988 to 45,054 _RS17455 EX31_RS17460: EX31_RS17460 - putative selenoprotein, at 45,047 to 45,352 _RS17460
Group Condition EX31_RS17440 EX31_RS17445 EX31_RS17450 EX31_RS17455 EX31_RS17460
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -0.1 -0.3 +0.1 -1.5
carbon source NLDM_metabolites (C) -0.1 -0.3 -0.7 +0.3 -0.3
nitrogen source L-Serine (N); ShewMM media; shaking +0.0 -0.1 -0.5 -0.2 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.0 -0.0 +0.0 -0.8
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 -0.1 -0.1 +0.1 -0.7
nl-ccm_agar NL-CCM_agar -0.1 +0.1 +0.0 -0.0 -0.9
mgl MGL +0.3 -0.2 -0.2 -0.0 -0.7
mgl MGL +0.2 +0.1 +0.1 -0.2 -0.9
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.2 -0.1 +0.1 -0.7
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 +0.1 -0.0 +0.1 -0.9
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.5 -0.4 -0.0 +0.3 -0.1
mgl MGL -0.2 +0.1 +0.1 +0.0 -0.5
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.3 -0.1 -0.0 +0.1 -0.5
carbon source NLDM_metabolites (C) -0.2 +0.1 -0.5 -0.1 +0.4
carbon source Sucrose (C) +0.0 +0.1 -0.6 +0.1 +0.3
nitrogen source L-Serine (N); RCH2 media; shaking +0.3 -0.2 -0.2 +0.1 -0.2
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.3 +0.1 -0.1 +0.0 -0.4
nf_with_fulln NF_with_fullN -0.3 +0.2 -0.2 +0.1 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.5 -0.1 +0.1 +0.0 -0.5
carbon source D-Mannitol (C) -0.4 +0.1 -0.0 -0.2 +0.6
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.4 +0.1 +0.2 +0.2 -0.6
carbon source D,L-Lactate (C) -0.3 +0.5 -0.1 +0.0 +0.2
nitrogen source L-Serine (N); ShewMM media; shaking +0.4 -0.1 +0.0 +0.3 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.3 -0.2 -0.2 -0.1 +0.6
carbon source D-Glucose (C) -0.0 +0.2 -0.1 -0.1 +0.8
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.2 -0.1 +0.3 +0.2 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.2 -0.0 +0.3 +0.1 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.2 +0.0 -0.0 +0.7
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 -0.1 +0.0 +0.1 +0.9
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.0 +0.1 +0.0 +1.1
remove
EX31_RS17440
plot		 remove
EX31_RS17445
plot		 remove
EX31_RS17450		 remove
EX31_RS17455
plot		 remove
EX31_RS17460
plot