Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS26065 and EX31_RS17045 are separated by 108 nucleotidesEX31_RS17045 and EX31_RS17050 overlap by 1 nucleotidesEX31_RS17050 and EX31_RS17055 are separated by 10 nucleotidesEX31_RS17055 and EX31_RS17060 are separated by 1 nucleotides EX31_RS26065: EX31_RS26065 - IS630 family transposase, at 801 to 908 _RS26065 EX31_RS17045: EX31_RS17045 - c-type cytochrome, at 1,017 to 1,331 _RS17045 EX31_RS17050: EX31_RS17050 - TlpA family protein disulfide reductase, at 1,331 to 1,804 _RS17050 EX31_RS17055: EX31_RS17055 - ABC transporter ATP-binding protein, at 1,815 to 2,534 _RS17055 EX31_RS17060: EX31_RS17060 - FtsX-like permease family protein, at 2,536 to 3,648 _RS17060
Group Condition EX31_RS26065 EX31_RS17045 EX31_RS17050 EX31_RS17055 EX31_RS17060
carbon source D-Mannitol (C) -1.3 -0.4 +0.1 +0.0 -0.1
carbon source casaminos (C) -0.9 -0.3 +0.0 -0.1 -0.0
carbon source D-Glucose (C) -1.0 -0.1 +0.1 -0.2 -0.1
carbon source Sucrose (C) -0.8 +0.0 -0.1 -0.1 -0.2
carbon source D,L-Lactate (C) -1.0 -0.1 -0.3 -0.0 +0.2
nf_with_fulln NF_with_fullN -0.8 +0.1 -0.1 +0.0 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.5 -0.1 -0.3 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.5 -0.2 +0.1 -0.1 +0.1
mgl MGL -0.5 +0.1 -0.1 +0.0 -0.3
carbon source casaminos (C) -0.8 +0.1 -0.0 -0.0 +0.1
carbon source D,L-Lactate (C) -0.9 -0.2 +0.3 +0.1 +0.1
carbon source Sucrose (C) -0.7 -0.0 +0.0 +0.2 -0.0
nl-ccm; vial NL-CCM; vial -0.6 +0.1 -0.0 -0.1 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.8 +0.4 -0.1 +0.1 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.4 -0.3 +0.2 +0.1 +0.0
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.4 -0.6 -0.2 +0.1 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.4 -0.3 +0.1 -0.0 +0.1
carbon source D-Xylose (C) -0.3 -0.4 +0.3 +0.0 -0.1
nl-ccm; vial NL-CCM; vial -0.5 +0.2 -0.1 +0.2 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.5 -0.2 -0.4 -0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.6 -0.2 -0.2 +0.1 -0.0
carbon source NLDM_metabolites (C) +0.4 -0.2 -0.3 +0.2 +0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.6 -0.2 -0.0 +0.1 -0.1
carbon source NLDM_metabolites (C) -0.3 +0.4 +0.4 +0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.9 -0.2 -0.3 +0.2 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.7 +0.1 +0.1 +0.0 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +1.0 -0.3 +0.2 -0.0 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.7 +0.0 +0.1 +0.1 -0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.9 +0.0 -0.0 +0.1 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking +1.2 -0.5 +0.3 +0.2 +0.1
remove
EX31_RS26065
plot		 remove
EX31_RS17045
plot		 remove
EX31_RS17050		 remove
EX31_RS17055
plot		 remove
EX31_RS17060
plot