Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS16975 and EX31_RS16980 are separated by 39 nucleotidesEX31_RS16980 and EX31_RS16985 are separated by 323 nucleotidesEX31_RS16985 and EX31_RS16990 are separated by 167 nucleotidesEX31_RS16990 and EX31_RS16995 are separated by 140 nucleotides EX31_RS16975: EX31_RS16975 - hypothetical protein, at 5,322 to 5,825 _RS16975 EX31_RS16980: EX31_RS16980 - ATP-dependent dethiobiotin synthetase BioD, at 5,865 to 6,551 _RS16980 EX31_RS16985: EX31_RS16985 - ROK family transcriptional regulator, at 6,875 to 8,098 _RS16985 EX31_RS16990: EX31_RS16990 - LysR family transcriptional regulator, at 8,266 to 9,165 _RS16990 EX31_RS16995: EX31_RS16995 - MFS transporter, at 9,306 to 10,598 _RS16995
Group Condition EX31_RS16975 EX31_RS16980 EX31_RS16985 EX31_RS16990 EX31_RS16995
nln NLN +0.1 -1.0 -0.7 -0.0 -0.2
mgl MGL -0.2 -1.3 +0.3 -0.4 -0.0
nf_with10percent_fulln NF_with10percent_fullN -0.3 -0.9 -0.4 +0.2 -0.2
nf_with_fulln NF_with_fullN -0.2 -0.6 -0.4 +0.3 -0.5
nln NLN -0.1 -0.6 -0.6 +0.1 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.0 -1.0 -0.2 +0.2 -0.3
nln NLN -0.0 -1.1 -0.1 +0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.5 -0.6 -0.3 +0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.8 -0.1 +0.1 -0.2
nf_with_fulln NF_with_fullN +0.1 -0.5 -0.9 +0.3 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.4 -0.7 +0.2 -0.3 -0.0
nf_with_fulln NF_with_fullN -0.1 -0.3 -0.8 +0.3 -0.1
nf_with_fulln NF_with_fullN +0.1 -0.7 -0.6 +0.4 -0.2
nitrogen source L-Serine (N); RCH2 media; shaking -0.0 -0.5 +0.0 +0.3 -0.6
carbon source casaminos (C) +0.2 -0.8 -0.2 -0.0 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 -0.5 -0.5 -0.0 +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.5 +0.2 -0.0 +0.2
carbon source D-Xylose (C) +0.3 -0.1 -0.7 +0.1 -0.2
carbon source NLDM_metabolites (C) -0.0 -1.0 -0.1 +0.5 +0.0
nf_with_fulln NF_with_fullN +0.3 -0.6 -0.2 +0.4 -0.3
nitrogen source L-Serine (N); ShewMM media; shaking -0.0 -0.7 +0.4 +0.1 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.3 -0.5 -0.3 +0.1 +0.2
mgl MGL +0.4 -0.5 +0.2 -0.0 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking +0.1 -0.5 +0.3 +0.2 -0.1
nf_with_fulln NF_with_fullN +0.2 +0.0 -0.4 +0.4 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 -0.6 +0.5 -0.0 +0.3
carbon source NLDM_metabolites (C) +0.0 -0.5 +0.5 +0.4 -0.2
carbon source Sucrose (C) +0.5 -0.1 -0.3 +0.3 +0.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.3 -0.2 +0.1 +0.7 +0.0
carbon source D,L-Lactate (C) +0.2 +1.1 +0.0 +0.1 -0.1
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EX31_RS16975
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EX31_RS16980
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EX31_RS16990
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EX31_RS16995
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