Fitness for 3 genes in Rahnella sp. WP5

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	EX31_RS16730	EX31_RS16735	EX31_RS16740
nitrogen source	L-Serine (N); RCH2 media; no shaking	-0.2	-1.3	-0.3
carbon source	D-Mannitol (C)	-0.3	-0.8	-0.4
carbon source	Sucrose (C)	-0.6	-0.5	+0.1
carbon source	D,L-Lactate (C)	-0.8	-0.6	+0.5
carbon source	NLDM_metabolites (C)	-1.1	-0.6	+0.8
carbon source	Sucrose (C)	-0.6	-0.3	+0.2
nitrogen source	L-Glutamine (N); RCH2 media; shaking	+0.2	-0.5	-0.4
nitrogen source	L-Serine (N); RCH2 media; no shaking	+0.3	-0.2	-0.8
nitrogen source	Ammonium chloride (N); RCH2 media; shaking	-0.3	+0.2	-0.5
carbon source	D-Xylose (C)	-0.5	-0.3	+0.2
nitrogen source	Ammonium chloride (N); ShewMM media; no shaking	+0.4	-0.9	+0.2
carbon source	D-Mannitol (C)	-0.3	-0.5	+0.7
carbon source	NLDM_metabolites (C)	-0.1	-0.5	+0.6
carbon source	D-Xylose (C)	-0.4	-0.1	+0.6
nitrogen source	Ammonium chloride (N); RCH2 media; no shaking	+0.3	-0.4	+0.6
nitrogen source	L-Serine (N); ShewMM media; no shaking	-0.3	+0.2	+0.6
mixed community	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum	+0.9	+0.3	-0.3
nl-ccm; ambient oxygen	NL-CCM; ambient oxygen	+0.8	+0.6	-0.3
mixed community	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum	+0.2	+0.5	+0.3
nl-ccm	NL-CCM	+0.3	+0.1	+0.5
nl-ccm; ambient oxygen	NL-CCM; ambient oxygen	+0.4	+0.4	+0.2
mixed community	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum	+0.6	+0.5	-0.1
nl-ccm; ambient oxygen	NL-CCM; ambient oxygen	+0.3	+0.5	+0.3
mixed community	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum	+0.4	+0.3	+0.5
mixed community	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum	+0.6	+0.4	+0.2
mixed community	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum	+0.2	+0.6	+0.4
mixed community	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum	+0.4	+0.3	+0.5
nl-ccm_agar	NL-CCM_agar	+0.5	+0.7	+0.0
nl-ccm; ambient oxygen	NL-CCM; ambient oxygen	+0.6	+0.7	-0.0
mixed community	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum	+0.1	+0.6	+0.6