Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS16490 and EX31_RS16495 are separated by 101 nucleotidesEX31_RS16495 and EX31_RS16500 are separated by 39 nucleotidesEX31_RS16500 and EX31_RS16505 are separated by 92 nucleotidesEX31_RS16505 and EX31_RS16510 are separated by 402 nucleotides EX31_RS16490: EX31_RS16490 - DUF4880 domain-containing protein, at 6,981 to 7,961 _RS16490 EX31_RS16495: EX31_RS16495 - TonB-dependent siderophore receptor, at 8,063 to 10,525 _RS16495 EX31_RS16500: EX31_RS16500 - ATP-binding cassette domain-containing protein, at 10,565 to 12,298 _RS16500 EX31_RS16505: EX31_RS16505 - sensor domain-containing phosphodiesterase, at 12,391 to 14,154 _RS16505 EX31_RS16510: EX31_RS16510 - EAL domain-containing protein, at 14,557 to 15,315 _RS16510
Group Condition EX31_RS16490 EX31_RS16495 EX31_RS16500 EX31_RS16505 EX31_RS16510
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.1 +0.2 -1.2
nf_with_fulln NF_with_fullN -0.0 +0.1 +0.0 +0.2 -1.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.0 +0.0 -0.1 -0.6
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.0 -0.0 -0.1 -0.6
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.1 +0.2 -0.9
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 -0.0 -0.1 -0.1 -0.4
nf_with_fulln NF_with_fullN +0.1 +0.1 +0.1 +0.2 -1.0
nf_with_fulln NF_with_fullN -0.0 +0.2 +0.2 +0.2 -1.0
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.1 +0.2 -0.7
nf_with10percent_fulln NF_with10percent_fullN -0.0 +0.1 -0.1 +0.2 -0.6
nf_with10percent_fulln NF_with10percent_fullN -0.2 +0.0 -0.0 +0.2 -0.5
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.1 -0.0 +0.2 -0.5
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.1 -0.0 +0.2 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking +0.2 -0.2 +0.2 -0.0 -0.4
nln NLN +0.0 +0.1 +0.0 +0.1 -0.5
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.0 -0.1 +0.2 -0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.2 -0.1 -0.1 +0.0 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.0 +0.1 -0.0 +0.3 -0.4
nf_with10percent_fulln NF_with10percent_fullN -0.0 +0.1 +0.0 +0.3 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.2 +0.0 -0.0 +0.1 -0.4
nln NLN -0.0 +0.2 +0.1 +0.0 -0.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.2 +0.0 +0.1 +0.1 -0.3
carbon source NLDM_metabolites (C) +0.4 +0.1 -0.2 +0.1 -0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.1 -0.0 +0.3 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.0 -0.1 +0.3 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.3 +0.1 +0.1 +0.1 +0.2
carbon source Sucrose (C) +0.1 -0.1 +0.1 +0.1 +0.4
carbon source D,L-Lactate (C) +0.2 -0.0 +0.0 -0.0 +0.5
carbon source casaminos (C) +0.3 +0.1 -0.1 +0.1 +0.3
carbon source NLDM_metabolites (C) -0.0 -0.0 +0.0 +0.1 +0.8
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EX31_RS16490
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EX31_RS16495
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