Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS14990 and EX31_RS14995 overlap by 4 nucleotidesEX31_RS14995 and EX31_RS15000 are separated by 16 nucleotidesEX31_RS15000 and EX31_RS15005 are separated by 134 nucleotidesEX31_RS15005 and EX31_RS15010 are separated by 5 nucleotides EX31_RS14990: EX31_RS14990 - acetolactate synthase 2 catalytic subunit, at 10,428 to 12,074 _RS14990 EX31_RS14995: EX31_RS14995 - acetolactate synthase 2 small subunit, at 12,071 to 12,334 _RS14995 EX31_RS15000: EX31_RS15000 - branched-chain amino acid transaminase, at 12,351 to 13,280 _RS15000 EX31_RS15005: EX31_RS15005 - dihydroxy-acid dehydratase, at 13,415 to 15,265 _RS15005 EX31_RS15010: EX31_RS15010 - threonine ammonia-lyase, biosynthetic, at 15,271 to 16,815 _RS15010
Group Condition EX31_RS14990 EX31_RS14995 EX31_RS15000 EX31_RS15005 EX31_RS15010
nitrogen source L-Glutamine (N); ShewMM media; no shaking -1.2 -0.8 -1.1 -6.5 -2.8
nitrogen source L-Serine (N); ShewMM media; shaking -2.7 -0.6 -1.6 -4.4 -2.7
carbon source D-Xylose (C) -1.0 -0.5 -1.1 -5.3 -4.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -1.3 -0.7 -1.2 -5.8 -2.8
nitrogen source L-Glutamine (N); RCH2 media; no shaking -1.3 -0.6 -1.3 -5.9 -2.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -1.2 -0.7 -1.2 -5.9 -2.7
carbon source D-Xylose (C) -0.9 -0.6 -1.0 -5.3 -3.8
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -1.4 -0.7 -1.0 -5.9 -2.5
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.9 -0.6 -1.3 -5.9 -2.8
carbon source D-Mannitol (C) -0.7 -0.4 -0.9 -5.5 -3.8
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.9 -0.4 -1.1 -6.1 -2.7
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.8 -0.6 -0.9 -6.3 -2.7
nitrogen source L-Glutamine (N); RCH2 media; no shaking -1.4 -0.6 -1.1 -5.5 -2.5
carbon source Sucrose (C) -0.9 -0.6 -0.9 -5.2 -3.5
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.8 -0.5 -1.7 -5.3 -2.7
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -1.0 -0.8 -1.1 -5.9 -2.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.8 -0.6 -1.2 -5.8 -2.7
nitrogen source L-Serine (N); ShewMM media; shaking -2.3 -0.8 -1.7 -4.0 -2.2
carbon source Sucrose (C) -0.7 -0.6 -1.1 -5.0 -3.5
carbon source D-Mannitol (C) -0.6 -0.5 -1.0 -4.8 -4.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.7 -0.6 -1.0 -6.0 -2.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking -1.1 -0.6 -1.1 -5.8 -2.3
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.9 -0.6 -1.6 -6.1 -1.6
nitrogen source L-Serine (N); ShewMM media; shaking -2.1 -0.7 -1.5 -3.8 -2.6
nitrogen source Ammonium chloride (N); RCH2 media; shaking -1.0 -0.5 -1.3 -5.3 -2.6
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.9 -0.6 -1.5 -6.1 -1.6
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.9 -0.6 -1.1 -5.9 -2.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.7 -0.5 -1.4 -5.7 -2.1
nf_with_fulln NF_with_fullN -1.1 -0.6 -1.4 -4.9 -2.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.9 -0.6 -0.8 -5.8 -2.0
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EX31_RS14990
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