Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS13915 and EX31_RS13920 are separated by 116 nucleotidesEX31_RS13920 and EX31_RS13925 are separated by 15 nucleotidesEX31_RS13925 and EX31_RS13930 are separated by 327 nucleotidesEX31_RS13930 and EX31_RS13935 are separated by 435 nucleotides EX31_RS13915: EX31_RS13915 - hypothetical protein, at 42,599 to 43,003 _RS13915 EX31_RS13920: EX31_RS13920 - hotdog fold thioesterase, at 43,120 to 43,539 _RS13920 EX31_RS13925: EX31_RS13925 - FAD-binding oxidoreductase, at 43,555 to 46,611 _RS13925 EX31_RS13930: EX31_RS13930 - AI-2E family transporter YdiK, at 46,939 to 48,036 _RS13930 EX31_RS13935: EX31_RS13935 - phosphoenolpyruvate synthase, at 48,472 to 50,847 _RS13935
Group Condition EX31_RS13915 EX31_RS13920 EX31_RS13925 EX31_RS13930 EX31_RS13935
carbon source D,L-Lactate (C) -0.1 +0.1 -0.9 -0.5 -3.5
carbon source D,L-Lactate (C) -0.3 +0.2 -0.7 -0.3 -3.5
carbon source D-Mannitol (C) -0.2 +0.2 -0.9 -0.2 -2.7
carbon source D-Mannitol (C) -0.1 +0.4 -0.9 -0.3 -2.7
carbon source casaminos (C) -0.3 +0.2 -0.3 -0.1 -1.9
carbon source casaminos (C) -0.3 +0.1 -0.0 -0.2 -1.8
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -0.4 -0.8 +0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.3 -0.2 -1.0 +0.2 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -0.3 -0.6 -0.0 -0.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 -0.6 -0.2 -0.2 -0.5
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.2 -0.1 -1.0 +0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 -0.2 -0.9 +0.1 -0.1
carbon source D-Glucose (C) +0.0 +0.1 -0.7 -0.4 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.2 -0.7 +0.2 -0.4
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.3 -0.8 +0.1 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.0 -0.4 -0.5 +0.2 -0.2
carbon source D-Xylose (C) +0.0 +0.3 -0.6 -0.3 -0.3
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.1 -0.4 -0.1 -0.5
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 -0.4 -0.5 +0.1 +0.0
carbon source Sucrose (C) +0.2 +0.4 -0.7 -0.4 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.1 -0.6 -0.1 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.2 -0.4 +0.2 -0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.3 -0.6 +0.2 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.0 -0.7 +0.2 -0.1
carbon source Sucrose (C) +0.0 +0.4 -0.8 -0.1 -0.0
carbon source D-Xylose (C) -0.1 +0.6 -0.5 -0.2 -0.3
nf_with_fulln NF_with_fullN -0.6 +0.2 +0.1 -0.1 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.4 +0.1 -0.6 -0.0 -0.3
nf_with_fulln NF_with_fullN -0.5 +0.4 +0.1 -0.1 +0.1
carbon source NLDM_metabolites (C) +0.1 +0.8 +0.0 -0.2 +0.4
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EX31_RS13915
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EX31_RS13920
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EX31_RS13935
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