Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS13680 and EX31_RS13685 are separated by 81 nucleotidesEX31_RS13685 and EX31_RS13690 are separated by 189 nucleotidesEX31_RS13690 and EX31_RS13695 are separated by 227 nucleotidesEX31_RS13695 and EX31_RS13700 are separated by 96 nucleotides EX31_RS13680: EX31_RS13680 - bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase, at 173,372 to 176,092 _RS13680 EX31_RS13685: EX31_RS13685 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 176,174 to 177,532 _RS13685 EX31_RS13690: EX31_RS13690 - MFS transporter, at 177,722 to 179,020 _RS13690 EX31_RS13695: EX31_RS13695 - 5S ribosomal RNA, at 179,248 to 179,363 _RS13695 EX31_RS13700: EX31_RS13700 - 23S ribosomal RNA, at 179,460 to 179,528 _RS13700
Group Condition EX31_RS13680 EX31_RS13685 EX31_RS13690 EX31_RS13695 EX31_RS13700
nf_with10percent_fulln NF_with10percent_fullN +0.0 N.D. -0.5 N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 N.D. -0.5 N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.1 N.D. -0.5 N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN -0.0 N.D. -0.3 N.D. N.D.
nf_with_fulln NF_with_fullN -0.0 N.D. -0.3 N.D. N.D.
nf_with_fulln NF_with_fullN +0.0 N.D. -0.3 N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 N.D. -0.4 N.D. N.D.
mgl MGL -0.1 N.D. -0.2 N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 N.D. -0.3 N.D. N.D.
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 N.D. -0.2 N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 N.D. -0.4 N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.0 N.D. -0.3 N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.1 N.D. -0.3 N.D. N.D.
nf_with10percent_fulln NF_with10percent_fullN +0.1 N.D. -0.2 N.D. N.D.
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 N.D. -0.3 N.D. N.D.
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 N.D. -0.2 N.D. N.D.
nf_with_fulln NF_with_fullN +0.1 N.D. -0.2 N.D. N.D.
nln NLN +0.1 N.D. -0.2 N.D. N.D.
nl-ccm; low oxygen NL-CCM; low oxygen +0.1 N.D. -0.2 N.D. N.D.
nf_with_fulln NF_with_fullN +0.1 N.D. -0.2 N.D. N.D.
nl-ccm; low oxygen NL-CCM; low oxygen +0.1 N.D. -0.2 N.D. N.D.
carbon source D,L-Lactate (C) +0.3 N.D. -0.2 N.D. N.D.
nln NLN +0.2 N.D. -0.1 N.D. N.D.
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.1 N.D. +0.2 N.D. N.D.
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.0 N.D. +0.3 N.D. N.D.
carbon source Sucrose (C) -0.0 N.D. +0.3 N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 N.D. +0.2 N.D. N.D.
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 N.D. +0.2 N.D. N.D.
nitrogen source L-Serine (N); ShewMM media; shaking -0.0 N.D. +0.3 N.D. N.D.
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 N.D. +0.3 N.D. N.D.
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EX31_RS13680
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EX31_RS13685
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EX31_RS13700
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