Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS13260 and EX31_RS13265 are separated by 24 nucleotidesEX31_RS13265 and EX31_RS13270 are separated by 277 nucleotidesEX31_RS13270 and EX31_RS13275 are separated by 164 nucleotidesEX31_RS13275 and EX31_RS13280 are separated by 134 nucleotides EX31_RS13260: EX31_RS13260 - glycoside hydrolase family 1 protein, at 79,125 to 80,561 _RS13260 EX31_RS13265: EX31_RS13265 - PTS sugar transporter subunit IIC, at 80,586 to 81,929 _RS13265 EX31_RS13270: EX31_RS13270 - PTS lactose/cellobiose transporter subunit IIA, at 82,207 to 82,524 _RS13270 EX31_RS13275: EX31_RS13275 - diaminopimelate decarboxylase, at 82,689 to 83,948 _RS13275 EX31_RS13280: EX31_RS13280 - LysR family transcriptional regulator, at 84,083 to 85,006 _RS13280
Group Condition EX31_RS13260 EX31_RS13265 EX31_RS13270 EX31_RS13275 EX31_RS13280
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.0 -0.1 -0.0 -6.4 -1.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.0 +0.1 -6.1 -1.5
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.0 +0.0 -0.7 -5.6 -1.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 -0.0 -0.2 -6.6 -0.6
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.0 +0.1 +0.3 -5.7 -1.6
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 -0.0 -0.2 -5.6 -1.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 -0.1 -0.4 -5.6 -0.5
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.0 +0.1 -5.3 -1.4
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 -0.0 +0.1 -5.4 -1.3
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.0 -0.1 -5.2 -1.3
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.0 -0.1 +0.0 -5.4 -1.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 -0.1 +0.1 -5.8 -0.7
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 +0.0 -0.1 -5.4 -1.0
carbon source Sucrose (C) +0.0 +0.0 +0.1 -5.4 -0.9
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.1 -0.0 -0.0 -5.1 -1.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 +0.0 +0.1 -5.4 -0.8
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.0 +0.0 +0.2 -5.3 -0.9
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 -0.1 -0.0 -4.8 -1.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.0 -0.0 +0.1 -5.0 -0.9
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.0 -0.0 +0.3 -5.4 -0.6
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.1 +0.0 +0.0 -4.9 -0.8
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 -0.0 +0.4 -5.2 -0.8
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 +0.0 -0.0 -4.7 -0.8
carbon source D-Glucose (C) +0.1 +0.0 +0.5 -5.2 -0.8
carbon source D-Mannitol (C) +0.0 +0.1 -0.2 -4.7 -0.6
carbon source D-Mannitol (C) +0.1 +0.1 +0.1 -4.9 -0.6
carbon source Sucrose (C) +0.0 -0.1 +0.3 -4.7 -0.8
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 +0.0 +0.2 -4.7 -0.7
carbon source D-Xylose (C) +0.1 +0.1 +0.2 -4.7 -0.4
nitrogen source L-Serine (N); RCH2 media; no shaking +0.0 +0.1 +0.4 -3.7 -0.9
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EX31_RS13260
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EX31_RS13265
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EX31_RS13275
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EX31_RS13280
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