Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS13225 and EX31_RS13230 overlap by 4 nucleotidesEX31_RS13230 and EX31_RS13235 are separated by 357 nucleotidesEX31_RS13235 and EX31_RS13240 are separated by 252 nucleotidesEX31_RS13240 and EX31_RS13245 overlap by 4 nucleotides EX31_RS13225: EX31_RS13225 - lysophospholipid transporter LplT, at 70,280 to 71,491 _RS13225 EX31_RS13230: EX31_RS13230 - bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase, at 71,488 to 73,653 _RS13230 EX31_RS13235: EX31_RS13235 - molybdopterin-dependent oxidoreductase, at 74,011 to 76,269 _RS13235 EX31_RS13240: EX31_RS13240 - HTH-type transcriptional regulator GalR, at 76,522 to 77,529 _RS13240 EX31_RS13245: EX31_RS13245 - GNAT family N-acetyltransferase, at 77,526 to 77,975 _RS13245
Group Condition EX31_RS13225 EX31_RS13230 EX31_RS13235 EX31_RS13240 EX31_RS13245
carbon source D,L-Lactate (C) -0.0 +0.1 +0.1 -2.6 +0.1
carbon source D,L-Lactate (C) +0.0 +0.0 +0.0 -2.1 +0.3
carbon source casaminos (C) +0.0 +0.1 -0.1 -0.8 -0.1
carbon source casaminos (C) -0.0 -0.1 -0.1 -0.8 +0.3
carbon source NLDM_metabolites (C) -0.3 -0.1 -0.2 -0.1 -0.1
carbon source D-Mannitol (C) -0.1 -0.1 -0.1 -0.4 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 -0.0 -0.1 -0.4 -0.1
carbon source D-Mannitol (C) -0.1 -0.1 +0.1 -0.4 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.2 +0.0 +0.1 -0.2 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.0 +0.0 -0.3 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 -0.2 -0.0 -0.2 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 -0.0 +0.1 -0.3 -0.2
carbon source Sucrose (C) -0.0 +0.1 -0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.1 +0.1 -0.3 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 +0.0 +0.0 -0.2 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 +0.1 -0.0 -0.1 -0.2
nitrogen source L-Serine (N); RCH2 media; no shaking -0.0 -0.0 +0.2 -0.2 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.1 +0.1 -0.3 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.0 +0.1 +0.1 -0.3 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking +0.1 +0.0 +0.1 -0.2 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.1 +0.1 +0.2 -0.2
nl-ccm NL-CCM +0.1 +0.1 -0.1 +0.2 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.1 +0.1 +0.2 -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.1 -0.1 -0.0 +0.2 +0.1
nl-ccm NL-CCM +0.1 -0.0 -0.0 +0.3 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.1 +0.1 +0.3 +0.0
carbon source NLDM_metabolites (C) -0.1 +0.1 +0.1 +0.2 +0.1
carbon source Sucrose (C) +0.1 +0.1 +0.1 -0.1 +0.2
nl-ccm NL-CCM +0.1 +0.1 -0.1 +0.2 +0.0
nf_with10percent_fulln NF_with10percent_fullN +0.1 -0.1 -0.0 +0.3 +0.0
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EX31_RS13225
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EX31_RS13230
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EX31_RS13245
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