Fitness for 4 genes in Rahnella sp. WP5

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500 ntEX31_RS12875 and EX31_RS12880 are separated by 179 nucleotidesEX31_RS12880 and EX31_RS12885 overlap by 8 nucleotidesEX31_RS12885 and EX31_RS12890 are separated by 61 nucleotides EX31_RS12875: EX31_RS12875 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 361 to 927 _RS12875 EX31_RS12880: EX31_RS12880 - methionine ABC transporter ATP-binding protein MetN, at 1,107 to 2,138 _RS12880 EX31_RS12885: EX31_RS12885 - methionine ABC transporter permease MetI, at 2,131 to 2,784 _RS12885 EX31_RS12890: EX31_RS12890 - MetQ/NlpA family lipoprotein, at 2,846 to 3,661 _RS12890
Group Condition EX31_RS12875 EX31_RS12880 EX31_RS12885 EX31_RS12890
mgl MGL -2.8 -0.3 -0.3 -0.0
mgl MGL -1.8 -0.4 -0.4 -0.3
carbon source NLDM_metabolites (C) -1.8 -0.9 -0.1 +0.1
nl-ccm; low oxygen NL-CCM; low oxygen -2.4 -0.1 +0.1 -0.2
mgl MGL -1.9 -0.2 -0.3 -0.2
mgl MGL -1.7 -0.4 -0.3 -0.2
carbon source D-Mannitol (C) -2.7 +0.1 +0.0 +0.1
carbon source D-Mannitol (C) -2.5 +0.1 +0.0 +0.1
nitrogen source L-Glutamine (N); RCH2 media; no shaking -2.2 +0.1 +0.1 -0.3
carbon source casaminos (C) -2.2 +0.1 -0.0 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -2.1 +0.1 -0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -2.3 -0.0 +0.1 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -2.4 +0.2 +0.1 +0.0
nf_with_fulln NF_with_fullN -2.5 +0.2 +0.3 -0.1
carbon source D-Xylose (C) -1.9 +0.2 +0.1 -0.4
nitrogen source Ammonium chloride (N); RCH2 media; shaking -2.2 +0.2 +0.1 -0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking -2.2 +0.1 +0.1 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -2.4 +0.3 +0.2 -0.0
nf_with_fulln NF_with_fullN -2.2 +0.1 +0.2 +0.0
nitrogen source Ammonium chloride (N); ShewMM media; shaking -2.3 +0.2 +0.1 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -2.5 +0.3 +0.2 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -2.0 +0.2 +0.1 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking -2.2 +0.2 +0.2 +0.1
nf_with_fulln NF_with_fullN -1.8 +0.1 +0.3 -0.2
nf_with_fulln NF_with_fullN -2.0 +0.2 +0.3 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -2.2 +0.2 +0.2 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking -2.4 +0.4 +0.3 +0.2
nitrogen source L-Glutamine (N); ShewMM media; no shaking -2.0 +0.2 +0.1 +0.1
carbon source D-Glucose (C) -2.1 +0.2 +0.2 +0.3
nitrogen source Ammonium chloride (N); RCH2 media; shaking -1.8 +0.2 +0.1 +0.2
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EX31_RS12875
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EX31_RS12885
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EX31_RS12890
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