Fitness for 5 genes in Rahnella sp. WP5

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 123 experiments or choose conditions or try the comparative fitness browser

500 ntEX31_RS12595 and EX31_RS12600 are separated by 23 nucleotidesEX31_RS12600 and EX31_RS12605 are separated by 247 nucleotidesEX31_RS12605 and EX31_RS12610 are separated by 95 nucleotidesEX31_RS12610 and EX31_RS12615 are separated by 598 nucleotides EX31_RS12595: EX31_RS12595 - type II and III secretion system protein, at 190,262 to 191,710 _RS12595 EX31_RS12600: EX31_RS12600 - pilus assembly protein, at 191,734 to 191,985 _RS12600 EX31_RS12605: EX31_RS12605 - type II secretion system protein, at 192,233 to 193,900 _RS12605 EX31_RS12610: EX31_RS12610 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 193,996 to 194,694 _RS12610 EX31_RS12615: EX31_RS12615 - pirin family protein, at 195,293 to 195,997 _RS12615
Group Condition EX31_RS12595 EX31_RS12600 EX31_RS12605 EX31_RS12610 EX31_RS12615
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -0.6 -0.2 -0.2 -0.0
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.6 -0.2 -0.2 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.6 -0.3 -0.1 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.6 -0.2 -0.2 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.6 -0.2 -0.1 -0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.2 -0.2 -0.3 -0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.7 -0.2 -0.1 +0.1
mgl MGL +0.0 -0.5 -0.0 -0.2 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.6 -0.2 -0.1 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.4 -0.2 -0.4 +0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.5 -0.2 -0.1 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.4 -0.1 -0.3 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.3 -0.2 -0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.4 -0.2 -0.1 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.3 -0.2 -0.1 +0.2
nln NLN -0.1 -0.5 -0.0 -0.1 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 -0.7 +0.1 +0.3 +0.2
carbon source casaminos (C) +0.2 -0.6 +0.2 +0.0 +0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 +0.3 +0.1 +0.2 -0.3
carbon source NLDM_metabolites (C) +0.1 -0.1 +0.3 +0.3 -0.4
carbon source D-Xylose (C) +0.2 +0.4 +0.2 -0.1 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.5 +0.1 +0.1 -0.3
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 -0.2 +0.1 +0.2 +0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 +0.6 -0.1 +0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.4 +0.2 +0.3 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking +0.1 +0.3 +0.2 +0.2 +0.2
nitrogen source L-Serine (N); ShewMM media; shaking +0.1 +0.4 +0.1 +0.2 +0.1
carbon source casaminos (C) +0.0 +0.7 +0.3 +0.1 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.1 +0.3 +0.1 +0.2 +0.2
nitrogen source L-Glutamine (N); ShewMM media; shaking +0.1 +0.7 +0.2 +0.2 -0.1
remove
EX31_RS12595
plot		 remove
EX31_RS12600
plot		 remove
EX31_RS12605		 remove
EX31_RS12610
plot		 remove
EX31_RS12615
plot