Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS12375 and EX31_RS12380 are separated by 25 nucleotidesEX31_RS12380 and EX31_RS12385 overlap by 4 nucleotidesEX31_RS12385 and EX31_RS12390 are separated by 67 nucleotidesEX31_RS12390 and EX31_RS12395 are separated by 110 nucleotides EX31_RS12375: EX31_RS12375 - PRD domain-containing protein, at 144,337 to 146,253 _RS12375 EX31_RS12380: EX31_RS12380 - PTS phosphocarrier protein NPr, at 146,279 to 146,551 _RS12380 EX31_RS12385: EX31_RS12385 - RNase adapter RapZ, at 146,548 to 147,402 _RS12385 EX31_RS12390: EX31_RS12390 - PTS IIA-like nitrogen regulatory protein PtsN, at 147,470 to 147,940 _RS12390 EX31_RS12395: EX31_RS12395 - ribosome hibernation promoting factor, at 148,051 to 148,338 _RS12395
Group Condition EX31_RS12375 EX31_RS12380 EX31_RS12385 EX31_RS12390 EX31_RS12395
nf_with_fulln NF_with_fullN -0.1 +0.3 -1.5 N.D. +0.3
nf_with_fulln NF_with_fullN -0.0 +0.2 -1.5 N.D. +0.2
nf_with_fulln NF_with_fullN -0.2 +0.3 -1.3 N.D. +0.3
nf_with_fulln NF_with_fullN -0.1 +0.3 -1.3 N.D. +0.2
nf_with_fulln NF_with_fullN -0.0 +0.3 -1.3 N.D. +0.2
nf_with_fulln NF_with_fullN +0.0 +0.3 -1.4 N.D. +0.4
nl-ccm; low oxygen NL-CCM; low oxygen -0.0 -0.0 -1.0 N.D. +0.3
nl-ccm; low oxygen NL-CCM; low oxygen -0.0 -0.2 -0.8 N.D. +0.3
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.5 -0.5 N.D. +0.5
nl-ccm; low oxygen NL-CCM; low oxygen -0.0 -0.0 -0.8 N.D. +0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 +0.0 -0.8 N.D. +0.4
carbon source D,L-Lactate (C) +0.1 -1.1 +0.1 N.D. +0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.0 -0.6 N.D. +0.5
nl-ccm; low oxygen NL-CCM; low oxygen -0.1 +0.4 -0.7 N.D. +0.2
carbon source casaminos (C) +0.2 -0.8 +0.2 N.D. +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.4 -0.6 N.D. +0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 +0.2 -0.6 N.D. +0.5
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.3 -0.6 N.D. +0.3
nl-ccm; high oxygen NL-CCM; high oxygen +0.0 +0.4 -0.9 N.D. +0.4
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 +0.4 -0.7 N.D. +0.5
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 +0.4 -0.7 N.D. +0.4
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.6 -0.7 N.D. +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.3 -0.7 N.D. +0.6
carbon source D,L-Lactate (C) -0.1 -0.4 +0.4 N.D. +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 +0.5 -0.7 N.D. +0.6
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.5 -0.5 N.D. +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.6 -0.7 N.D. +0.6
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.2 +0.5 -0.5 N.D. +0.5
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 +0.6 -0.4 N.D. +0.7
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +0.5 +0.6 N.D. -0.1
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EX31_RS12375
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EX31_RS12380
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EX31_RS12390
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EX31_RS12395
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