Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS12270 and EX31_RS12275 are separated by 273 nucleotidesEX31_RS12275 and EX31_RS12280 are separated by 7 nucleotidesEX31_RS12280 and EX31_RS12285 are separated by 10 nucleotidesEX31_RS12285 and EX31_RS12290 are separated by 7 nucleotides EX31_RS12270: EX31_RS12270 - HTH-type transcriptional activator AaeR, at 124,936 to 125,874 _RS12270 EX31_RS12275: EX31_RS12275 - AaeX family protein, at 126,148 to 126,351 _RS12275 EX31_RS12280: EX31_RS12280 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 126,359 to 127,294 _RS12280 EX31_RS12285: EX31_RS12285 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 127,305 to 129,263 _RS12285 EX31_RS12290: EX31_RS12290 - galactoside O-acetyltransferase, at 129,271 to 129,852 _RS12290
Group Condition EX31_RS12270 EX31_RS12275 EX31_RS12280 EX31_RS12285 EX31_RS12290
carbon source NLDM_metabolites (C) -0.2 -0.5 -0.1 -0.1 -0.1
carbon source casaminos (C) +0.0 +0.1 -0.0 -0.3 -0.4
carbon source D,L-Lactate (C) -0.3 +0.1 -0.2 +0.1 -0.3
mgl MGL -0.3 -0.0 -0.0 -0.1 -0.0
mgl MGL -0.2 -0.2 +0.0 -0.1 +0.0
carbon source Sucrose (C) -0.4 +0.1 -0.1 +0.2 -0.2
nf_with_fulln NF_with_fullN -0.0 -0.3 -0.0 -0.1 +0.1
nf_with_fulln NF_with_fullN -0.0 -0.3 -0.0 -0.1 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 -0.2 +0.1 -0.1 -0.0
nf_with_fulln NF_with_fullN +0.1 -0.2 -0.0 -0.1 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 +0.1 +0.0 -0.1 -0.2
nln NLN +0.1 -0.2 -0.1 -0.1 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 +0.0 -0.1 -0.1 -0.1
carbon source D-Glucose (C) -0.2 -0.1 -0.0 +0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.3 +0.0 +0.0 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.2 -0.1 -0.1 +0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.0 +0.1 +0.1 -0.1 -0.1
carbon source NLDM_metabolites (C) -0.3 +0.1 +0.1 +0.1 +0.0
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.1 +0.2 +0.0 -0.2 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.0 +0.1 +0.0 +0.2 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.1 +0.1 +0.0 +0.0 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.1 +0.1 -0.2 -0.0 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.0 +0.2 -0.1 +0.1 -0.0
nitrogen source Ammonium chloride (N); ShewMM media; no shaking +0.2 +0.2 -0.0 -0.1 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.0 +0.3 +0.0 -0.0 -0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.2 +0.1 -0.0 -0.1
mgl MGL +0.2 +0.2 +0.1 -0.0 -0.1
carbon source D-Mannitol (C) +0.1 +0.2 -0.0 +0.1 +0.1
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.1 +0.3 +0.2 +0.0 -0.2
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.0 +0.2 +0.0 +0.0 +0.1
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EX31_RS12270
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EX31_RS12275
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EX31_RS12285
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EX31_RS12290
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