Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS12150 and EX31_RS12155 are separated by 103 nucleotidesEX31_RS12155 and EX31_RS12160 are separated by 417 nucleotidesEX31_RS12160 and EX31_RS12165 are separated by 86 nucleotidesEX31_RS12165 and EX31_RS12170 are separated by 420 nucleotides EX31_RS12150: EX31_RS12150 - amino acid ABC transporter permease, at 97,488 to 98,666 _RS12150 EX31_RS12155: EX31_RS12155 - amino acid ABC transporter substrate-binding protein, at 98,770 to 99,795 _RS12155 EX31_RS12160: EX31_RS12160 - hypothetical protein, at 100,213 to 100,398 _RS12160 EX31_RS12165: EX31_RS12165 - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 100,485 to 101,405 _RS12165 EX31_RS12170: EX31_RS12170 - DoxX family protein, at 101,826 to 102,254 _RS12170
Group Condition EX31_RS12150 EX31_RS12155 EX31_RS12160 EX31_RS12165 EX31_RS12170
nitrogen source L-Serine (N); RCH2 media; no shaking -0.5 -0.5 -0.2 +0.0 -0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.5 -0.5 +0.0 -0.1 -0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.3 -0.3 -0.2 +0.0 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.5 -0.4 +0.0 -0.1 +0.0
nitrogen source L-Serine (N); RCH2 media; no shaking -0.4 -0.3 -0.2 +0.1 -0.0
nitrogen source L-Serine (N); ShewMM media; no shaking -0.4 -0.5 +0.0 -0.1 +0.2
nl-ccm NL-CCM -0.1 -0.1 -0.4 -0.0 -0.1
nitrogen source L-Serine (N); RCH2 media; shaking -0.4 -0.4 +0.0 +0.0 +0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.2 -0.3 +0.1 -0.0 -0.2
nl-ccm_agar NL-CCM_agar -0.2 -0.2 -0.4 +0.1 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.1 -0.5 -0.1 +0.1
nl-ccm_agar NL-CCM_agar -0.1 -0.1 -0.3 -0.0 +0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.4 -0.1 -0.2 +0.0 +0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.1 -0.2 +0.1 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.2 -0.2 +0.1 -0.0
nitrogen source L-Serine (N); RCH2 media; shaking -0.3 -0.3 +0.1 +0.1 -0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.4 -0.4 +0.3 +0.1 +0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.2 -0.1 +0.2 -0.2
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.3 -0.2 +0.1 +0.0 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.2 +0.1 +0.1 -0.2
carbon source NLDM_metabolites (C) +0.0 +0.1 +0.2 -0.0 -0.3
mgl MGL +0.0 +0.3 -0.1 -0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.2 +0.0 +0.3 -0.1 +0.1
carbon source D-Xylose (C) +0.0 -0.1 +0.2 -0.1 +0.2
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.3 -0.1 +0.2
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.2 -0.1 +0.3
nln NLN -0.1 -0.0 +0.3 +0.1 +0.2
nf_with_fulln NF_with_fullN -0.1 +0.1 +0.3 -0.1 +0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.1 +0.1 +0.4 +0.1 -0.1
carbon source Sucrose (C) +0.2 -0.0 +0.2 +0.2 +0.1
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EX31_RS12170
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