Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS12095 and EX31_RS12100 are separated by 235 nucleotidesEX31_RS12100 and EX31_RS12105 are separated by 10 nucleotidesEX31_RS12105 and EX31_RS12110 are separated by 268 nucleotidesEX31_RS12110 and EX31_RS12115 are separated by 409 nucleotides EX31_RS12095: EX31_RS12095 - myo-inositol-1-monophosphatase, at 83,477 to 84,280 _RS12095 EX31_RS12100: EX31_RS12100 - methyl-accepting chemotaxis protein, at 84,516 to 86,078 _RS12100 EX31_RS12105: EX31_RS12105 - bifunctional diguanylate cyclase/phosphodiesterase, at 86,089 to 88,182 _RS12105 EX31_RS12110: EX31_RS12110 - glutathione S-transferase, at 88,451 to 89,119 _RS12110 EX31_RS12115: EX31_RS12115 - NCS2 family permease, at 89,529 to 90,896 _RS12115
Group Condition EX31_RS12095 EX31_RS12100 EX31_RS12105 EX31_RS12110 EX31_RS12115
nitrogen source L-Serine (N); ShewMM media; shaking -0.2 +0.1 -0.1 -0.2 -0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.2 +0.0 +0.1 -0.3 +0.1
carbon source D-Glucose (C) +0.1 -0.0 +0.0 -0.3 -0.1
nitrogen source L-Serine (N); ShewMM media; no shaking -0.3 +0.0 +0.0 -0.1 +0.0
mgl MGL -0.1 -0.1 +0.1 -0.2 -0.0
nln NLN -0.0 +0.0 +0.1 -0.4 +0.0
nln NLN -0.1 +0.0 +0.2 -0.3 -0.1
nitrogen source L-Serine (N); RCH2 media; no shaking -0.1 +0.1 -0.0 -0.2 +0.1
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 +0.0 -0.1 -0.1 +0.2
nln NLN +0.0 -0.0 +0.1 -0.3 +0.0
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.1 -0.1 +0.1 -0.2 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.0 +0.0 -0.3 +0.2
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.0 +0.1 +0.1 -0.3 +0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.1 -0.0 -0.3 +0.3
nln NLN -0.0 +0.1 +0.2 -0.3 +0.1
nln NLN +0.1 -0.0 +0.2 -0.2 +0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.1 +0.1 -0.2 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 +0.1 +0.0 -0.2 +0.1
nl-ccm_agar NL-CCM_agar +0.1 +0.0 +0.2 -0.2 +0.0
nl-ccm_agar NL-CCM_agar -0.0 +0.0 +0.3 -0.1 +0.1
carbon source Sucrose (C) +0.0 -0.2 -0.0 +0.3 +0.1
nl-ccm_agar NL-CCM_agar -0.1 +0.1 +0.3 -0.2 +0.1
nl-ccm_agar NL-CCM_agar +0.1 -0.0 +0.2 -0.1 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 -0.0 +0.1 -0.1 +0.2
nl-ccm; low oxygen NL-CCM; low oxygen +0.1 +0.1 +0.1 -0.1 +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.1 +0.1 -0.2 +0.2
nl-ccm; high oxygen NL-CCM; high oxygen +0.3 +0.0 +0.1 -0.1 +0.1
nl-ccm_agar NL-CCM_agar +0.2 +0.0 +0.3 -0.2 +0.1
nl-ccm_agar NL-CCM_agar +0.1 +0.1 +0.3 -0.1 +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.1 +0.1 -0.2 +0.2
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EX31_RS12095
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EX31_RS12100
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EX31_RS12110
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EX31_RS12115
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