Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS11300 and EX31_RS11305 are separated by 77 nucleotidesEX31_RS11305 and EX31_RS11310 are separated by 11 nucleotidesEX31_RS11310 and EX31_RS11315 are separated by 6 nucleotidesEX31_RS11315 and EX31_RS11320 are separated by 113 nucleotides EX31_RS11300: EX31_RS11300 - flagellar hook protein FlgE, at 192,685 to 193,929 _RS11300 EX31_RS11305: EX31_RS11305 - flagellar hook assembly protein FlgD, at 194,007 to 194,711 _RS11305 EX31_RS11310: EX31_RS11310 - flagellar basal body rod protein FlgC, at 194,723 to 195,127 _RS11310 EX31_RS11315: EX31_RS11315 - flagellar basal body rod protein FlgB, at 195,134 to 195,544 _RS11315 EX31_RS11320: EX31_RS11320 - flagellar basal body P-ring formation protein FlgA, at 195,658 to 196,440 _RS11320
Group Condition EX31_RS11300 EX31_RS11305 EX31_RS11310 EX31_RS11315 EX31_RS11320
nitrogen source L-Glutamine (N); RCH2 media; no shaking -1.6 -1.5 -1.2 -2.3 -1.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking -1.5 -1.0 -1.3 -1.1 -0.8
nitrogen source L-Glutamine (N); RCH2 media; no shaking -1.2 -1.0 -1.2 -1.1 -0.5
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -1.0 -0.3 -1.4 -1.5 -0.7
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -1.1 -0.6 -1.0 -0.9 -0.6
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -1.1 -0.5 -1.0 -0.6 -0.5
nitrogen source L-Glutamine (N); ShewMM media; no shaking -1.1 -0.7 -0.7 -0.3 -0.8
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.9 -0.8 -0.7 -0.1 -0.9
nitrogen source L-Glutamine (N); ShewMM media; no shaking -0.8 -0.4 -0.9 +0.0 -0.8
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.5 -0.0 -0.5 -1.3 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.5 +0.0 -0.6 -0.5 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 +0.1 -0.1 -0.8 -0.2
carbon source NLDM_metabolites (C) +0.1 +0.2 -0.0 -1.3 +0.4
nl-ccm; high oxygen NL-CCM; high oxygen -0.3 +0.1 -0.3 +0.5 -0.3
carbon source D-Xylose (C) +0.1 -0.2 -0.2 -0.4 +0.7
carbon source D-Xylose (C) +0.2 -0.2 -0.3 +0.2 +0.5
carbon source D-Mannitol (C) +0.2 -0.3 -0.2 +0.5 +0.2
carbon source D-Glucose (C) +0.2 -0.2 -0.3 +0.7 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.2 +0.3 -0.1 +0.6 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; shaking +0.2 -0.1 -0.1 +0.5 +0.4
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.3 +0.2 +0.5 -0.2
carbon source NLDM_metabolites (C) +0.4 -0.7 +0.3 +0.2 +0.7
carbon source casaminos (C) +0.2 -0.4 +0.1 +0.6 +0.6
carbon source Sucrose (C) +0.1 +0.1 -0.0 +0.4 +0.7
nitrogen source L-Serine (N); ShewMM media; no shaking +0.3 +0.2 +0.4 +0.1 +0.5
nitrogen source L-Serine (N); RCH2 media; no shaking +0.4 +0.1 +0.2 +0.8 +0.3
nitrogen source L-Serine (N); RCH2 media; no shaking +0.4 +0.2 +0.6 +0.5 +0.4
nitrogen source L-Serine (N); ShewMM media; no shaking +0.4 -0.0 +0.6 +1.2 +0.3
nitrogen source L-Serine (N); ShewMM media; no shaking +0.4 +0.2 +0.6 +0.8 +0.3
nitrogen source L-Serine (N); RCH2 media; no shaking +0.5 +0.2 +0.5 +0.8 +0.6
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