Fitness for 5 genes in Rahnella sp. WP5

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500 ntEX31_RS11235 and EX31_RS11240 are separated by 15 nucleotidesEX31_RS11240 and EX31_RS11245 are separated by 15 nucleotidesEX31_RS11245 and EX31_RS11250 are separated by 111 nucleotidesEX31_RS11250 and EX31_RS11255 are separated by 389 nucleotides EX31_RS11235: EX31_RS11235 - ABC transporter substrate-binding protein, at 180,368 to 181,300 _RS11235 EX31_RS11240: EX31_RS11240 - GNAT family N-acetyltransferase, at 181,316 to 181,831 _RS11240 EX31_RS11245: EX31_RS11245 - amino acid ABC transporter permease, at 181,847 to 182,761 _RS11245 EX31_RS11250: EX31_RS11250 - amino acid ABC transporter ATP-binding protein, at 182,873 to 183,622 _RS11250 EX31_RS11255: EX31_RS11255 - CidA/LrgA family protein, at 184,012 to 184,416 _RS11255
Group Condition EX31_RS11235 EX31_RS11240 EX31_RS11245 EX31_RS11250 EX31_RS11255
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 -1.1 +0.3 -0.9 -0.1
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.4 -1.6 +0.1 +0.2 +0.1
nitrogen source L-Glutamine (N); RCH2 media; shaking -0.1 -0.7 +0.1 -0.5 -0.2
nf_with_fulln NF_with_fullN -0.1 -0.7 -0.0 +0.2 -0.6
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.3 -1.2 +0.1 +0.4 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.3 -0.5 +0.0 -0.1 -0.3
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.1 -1.5 +0.3 +0.1 +0.1
carbon source NLDM_metabolites (C) -0.2 -0.5 -1.2 +0.5 +0.5
nitrogen source L-Serine (N); RCH2 media; no shaking -0.3 -0.6 +0.3 -0.2 -0.1
nf_with_fulln NF_with_fullN -0.1 -0.5 -0.0 +0.6 -0.7
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.1 -0.9 +0.1 +0.2 +0.0
nitrogen source L-Serine (N); ShewMM media; shaking -0.1 -0.7 +0.3 -0.1 +0.0
nln NLN +0.3 -1.0 -0.0 +0.4 -0.1
nf_with_fulln NF_with_fullN +0.0 -0.2 -0.2 +0.5 -0.5
nitrogen source L-Glutamine (N); RCH2 media; no shaking +0.1 +0.3 +0.1 -0.8 -0.0
carbon source D-Glucose (C) -0.3 -0.6 +0.4 +0.1 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking -0.0 -0.9 +0.3 +0.3 +0.1
nitrogen source Ammonium chloride (N); ShewMM media; shaking +0.1 -0.7 +0.2 +0.0 +0.2
carbon source D,L-Lactate (C) +0.2 -0.3 +0.1 -0.4 +0.4
nf_with_fulln NF_with_fullN +0.2 +0.2 -0.4 +0.4 -0.5
nf_with_fulln NF_with_fullN +0.1 -0.3 +0.2 +0.5 -0.5
nf_with_fulln NF_with_fullN +0.1 +0.3 -0.0 +0.3 -0.5
mgl MGL +0.2 +0.5 +0.1 -0.7 +0.1
nitrogen source Ammonium chloride (N); RCH2 media; no shaking +0.2 -0.6 +0.1 +0.5 +0.0
carbon source casaminos (C) -0.2 +0.3 +0.3 -0.3 +0.3
nl-ccm; low oxygen NL-CCM; low oxygen +0.2 +0.5 -0.2 +0.1 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.3 +0.4 +0.2 -0.2 -0.2
nitrogen source Ammonium chloride (N); RCH2 media; no shaking -0.1 -0.2 +0.3 +0.4 +0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 +0.5 +0.2 +0.3 -0.2
carbon source D,L-Lactate (C) -0.0 +0.3 +0.5 +0.2 +0.5
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EX31_RS11235
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EX31_RS11240
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EX31_RS11250
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EX31_RS11255
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